FFCP PHASE1:Hg19::chr20:44523645..44523673,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:44523645..44523673,+ | |||
|coexpression_cluster_id=C1869 | |||
|description=CAGE_peak_at_chr20:44523645..44523673,+ | |||
|id=chr20:44523645..44523673,+ | |||
|ontology_enrichment_celltype=CL:0000048!3.73e-10!430;CL:0000144!4.38e-10!625;CL:0000055!9.67e-10!180;CL:0000723!2.91e-09!436;CL:0000034!4.34e-09!444;CL:0002371!4.60e-09!591;CL:0000548!8.49e-09!679;CL:0000004!8.49e-09!679;CL:0000255!8.49e-09!679;CL:0000012!1.97e-08!682;CL:0000222!6.23e-08!119;CL:0002320!3.01e-07!365;CL:0002194!3.41e-07!63;CL:0000576!3.41e-07!63;CL:0000040!3.41e-07!63;CL:0000559!3.41e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.94e-08;39!CL:0000234;1.94e-08;39!CL:0000860;8.52e-07;33!CL:0002057;8.52e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.39e-11,427;CL:0000723,1.34e-10,433;CL:0000034,4.20e-10,441;CL:0002320,1.52e-09,361;CL:0000134,4.25e-08,354;CL:0000222,1.22e-07,121;CL:0000473,1.31e-07,48;CL:0000234,1.31e-07,48;CL:0000219,8.09e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.13e-11!448;UBERON:0004120!1.13e-11!448;UBERON:0006603!1.13e-11!448;UBERON:0002204!5.10e-08!167;UBERON:0003081!3.04e-07!216;UBERON:0002384!3.17e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.95e-13,315;UBERON:0004120,3.95e-13,315;UBERON:0006603,3.95e-13,315;UBERON:0002384,1.35e-09,371;UBERON:0002204,1.43e-08,167;UBERON:0003081,8.35e-08,203 | |||
|phase1_expression=2.90685406832891,8.77812147953031,2.25527046553554,4.00293193412522,8.93922188854576,6.97870819280295,15.1979926900986,0.631719873426831,2.61185628199839,0.491467873003018,1.39560233594486,0.218441372130172,1.84636884759917,1.8564952944007,3.97676850873499,8.0679017574213,5.42425075221579,3.65155045193687,4.87932798790507,0.246242116153576,2.44800829493104,0.626909442956176,0.572471974262113,0.821246550437305,0.753255837568817,0.382067028739756,0.328402357799783,0.157421562627358,0.786728553697808,0.383829398097213,0.928896739896456,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0.293600439334847,0,3.81034450193269,0.217010870715852,4.03047853631864,4.85840499028469,1.03030227053675,2.4717700592526,3.02300754951048,1.4555043671269,3.0215774797739,1.23350366406548,1.54853185447552,8.34307937734236,2.0492856522328,2.12834006899727,3.10271112662957,1.29096936716765,6.77132432971709,5.64727018627814,2.18324920046277,2.02251136000576,4.59125838556354,1.60464513538047,1.27867425159808,2.96866170168044,3.19141852194611,1.70489900213078,4.35313857942876,0,0.622822248995575,4.77372463987812,3.12889751052121,2.38907729175628,3.63239701580021,0.736555271975129,0.632924774881769,0.845021145247767,1.70083439972035,0.209658645508376,3.36985893439485,1.65194582125657,0.964353520182481,0.285012743741249,1.59133341759272,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,1.22551502573691,1.76763544484902,1.10766947291811,0.541607727530031,1.92136979588513,0.780356085359269,0.493313713811028,0.829050053357545,0,0,0,0,0.453237370790265,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0.255973222308837,0,0.947109008176067,0,0,0.802320587350522,0.724122019413995,0,7.37770945674,0.895037932904712,1.0843174571537,2.50668955317945,5.93870727739377,0.795285947051099,2.91980922181582,0.945348171640679,1.55210578223795,0.43917392846563,1.70272798147026,0.364295288292542,0,0.97364218096405,1.0447784237956,4.38761269712255,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0,0,2.09749718104953,3.85165258716094,1.04497483268405,1.8089173141853,1.42306505074684,1.33888245105868,3.22263453687318,0,3.90499292077071,1.47065232138347,4.0507097394088,0.892997282840798,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,1.49091585508596,1.8994576749687,1.05927344650575,13.7681577959431,3.90135220418193,3.92474320099615,2.1349799145941,10.3600370335207,0.311211035399766,1.88594940897563,1.30769522490767,0.302714855289863,0.576175924479999,0.468642863667593,2.80944069147288,2.2818872861778,4.03511437489863,1.05691048779388,0.323745888736263,0.842704840213491,0.61246251376468,2.57952066354713,0.619954687054593,1.18800285728205,7.41800787835671,0,3.59309070908119,0.336672227908132,1.00094815897571,0.554128230968366,0.438977620880838,5.51678032438235,3.45547535485173,1.24775401476023,1.79389635688862,1.49490172172997,1.05965950579781,4.50136644126603,1.13357782162283,1.8034837803194,1.11670113798954,1.35021065793013,1.85130309806277,1.26216887122057,0.644349290496095,2.90962902273861,2.4850671476163,1.5112814734146,0.169560592310488,0.773043412653187,0,0.286804595389004,0.975789649036763,0.530119073285941,1.04574548582567,1.14027160516907,2.01856680700503,0,1.56449532329816,5.14592750554308,0,5.57241513638375,9.38443326170461,2.48444280083672,2.52877035117153,0.482022059766964,1.54411561825352,1.52515610864684,1.42362371466658,2.02246962240247,0.98110732562673,1.53898862778556,4.42893272774789,1.40241773803446,1.6462960453256,4.41026134156626,3.80265104465493,3.9313088667105,1.18157981336281,0.882926198829301,1.96781501668982,0.686271241194102,0.219500570817251,0,0.402115889646523,0.277765335475589,0,2.07986957055916,4.3299402607582,0.579652024875384,0,0.577465791044295,1.85194205030644,5.13686211033415,0,0.858486162094873,3.93947209739836,1.40402559083543,4.60756603095058,0,1.00789276919316,0.283550194484773,0.0895585227028483,0.581267877027924,0,0.492663237895943,1.05658120815871,0,0.144119953416961,0,0.761974731506028,5.72982638337417,4.68869788840188,1.71072446022705,5.03854714246285,2.40274446275134,5.71652865261156,0.224262168690721,1.30788020649984,0.1466765716419,2.71470603091333,0,1.690605505112,2.12750493267896,2.08014873822732,0,0,1.0656887160644,1.00084595560703,1.62786481617433,0,0.65147236858747,2.13235169245527,0,2.1100756394171,1.74306691720059,2.29937879718731,19.4598049025905,16.5744840172602,46.383466686267,1.91699884393266,2.29723871668228,0,1.88215698667853,4.9314317412092,0.537182889719687,0.560425719967636,0.197030760201927,0.431255149719035,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0.637938751653163,1.49801404789436,11.966458368161,0.414415513436035,3.0672872929785,9.00306937907419,3.52644530809656,3.53550464602372,7.13715955188647,4.41566762095017,0.702848489956279,0.300946099727719,11.3703752027992,9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| |||
|short_description=p@chr20:44523645..44523673,+ | |||
}} |
Latest revision as of 14:33, 28 July 2015
Short description: | p@chr20:44523645..44523673, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44523645..44523673, + |
Coexpression cluster: | C1869_Monocytederived_leiomyoma_Osteoblast_Fibroblast_Prostate_mixed_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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multi fate stem cell | 1.39e-11 | 427 |
somatic stem cell | 1.34e-10 | 433 |
stem cell | 4.20e-10 | 441 |
connective tissue cell | 1.52e-09 | 361 |
mesenchymal cell | 4.25e-08 | 354 |
mesodermal cell | 1.22e-07 | 121 |
defensive cell | 1.31e-07 | 48 |
phagocyte | 1.31e-07 | 48 |
motile cell | 8.09e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.95e-13 | 315 |
mesoderm-derived structure | 3.95e-13 | 315 |
presumptive mesoderm | 3.95e-13 | 315 |
connective tissue | 1.35e-09 | 371 |
musculoskeletal system | 1.43e-08 | 167 |
lateral plate mesoderm | 8.35e-08 | 203 |