FFCP PHASE1:Hg19::chr20:48121333..48121349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48121333..48121349,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48121333..48121349,- | |description=CAGE_peak_at_chr20:48121333..48121349,- | ||
|id=chr20:48121333..48121349,- | |id=chr20:48121333..48121349,- | ||
|ontology_enrichment_celltype=CL:0000077!1.64e-09!19;CL:0000055!6.97e-09!180;CL:0000499!1.52e-07!27;CL:1000306!3.80e-07!4;CL:0002547!3.80e-07!4;CL:0000222!9.18e-07!119 | |ontology_enrichment_celltype=CL:0000077!1.64e-09!19;CL:0000055!6.97e-09!180;CL:0000499!1.52e-07!27;CL:1000306!3.80e-07!4;CL:0002547!3.80e-07!4;CL:0000222!9.18e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000135;2.96e-19;3!CL:0000388;2.96e-19;3!CL:0000746;1.38e-18;3!CL:0000737;4.43e-14;4!CL:1000306;6.18e-14;4!CL:0002547;6.18e-14;4!CL:0000077;4.11e-11;19!CL:0000214;2.78e-09;3!CL:0002579;7.27e-09;3!CL:0000499;2.43e-07;28!CL:0000511;4.33e-07;1!CL:0002625;4.33e-07;1!CL:0000216;4.33e-07;1!CL:0002591;4.33e-07;1!CL:0002616;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.88e-19,3;CL:0000388,2.88e-19,3;CL:0000746,1.47e-18,3;CL:0000513,1.47e-18,3;CL:1000306,3.40e-14,4;CL:0002547,3.40e-14,4;CL:0000737,4.64e-14,4;CL:0000077,3.73e-11,19;CL:0000214,2.84e-09,3;CL:0002579,8.69e-09,3;CL:0000222,4.52e-08,121;CL:0000057,1.84e-07,76;CL:0000499,2.55e-07,28;CL:0002616,3.02e-07,1;CL:0000511,3.62e-07,1;CL:0002625,3.62e-07,1;CL:0000216,3.62e-07,1;CL:0002591,6.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000513;1.38e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000948!1.82e-10!24;UBERON:0005498!1.82e-10!24;UBERON:0004140!1.82e-10!24;UBERON:0009881!1.82e-10!24;UBERON:0004141!1.82e-10!24;UBERON:0003084!1.82e-10!24;UBERON:0007005!1.82e-10!24;UBERON:0004139!1.82e-10!24;UBERON:0004291!1.82e-10!24;UBERON:0007100!4.29e-10!27;UBERON:0004872!5.07e-10!84;UBERON:0001637!3.31e-08!42;UBERON:0003509!3.31e-08!42;UBERON:0004572!3.31e-08!42;UBERON:0001009!3.33e-07!113;UBERON:0000415!3.80e-07!4;UBERON:0007240!3.80e-07!4;UBERON:0005742!3.80e-07!4;UBERON:0005734!3.80e-07!4;UBERON:0004664!3.80e-07!4;UBERON:0004663!3.80e-07!4;UBERON:0004535!4.38e-07!110;UBERON:0004573!5.60e-07!33;UBERON:0004571!5.60e-07!33;UBERON:0003914!7.85e-07!118;UBERON:0002385!9.43e-07!63;UBERON:0001015!9.43e-07!63;UBERON:0000383!9.43e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.96e-19;3!UBERON:0000043;2.96e-19;3!UBERON:0007845;2.96e-19;3!UBERON:0004797;6.18e-14;4!UBERON:0000415;6.18e-14;4!UBERON:0007240;6.18e-14;4!UBERON:0005742;6.18e-14;4!UBERON:0005734;6.18e-14;4!UBERON:0004664;6.18e-14;4!UBERON:0004663;6.18e-14;4!UBERON:0004457;5.17e-11;9!UBERON:0000042;5.17e-11;9!UBERON:0006915;2.78e-09;3!UBERON:0007616;2.78e-09;3!UBERON:0002217;2.78e-09;3!UBERON:0002018;2.78e-09;3!UBERON:0004905;2.26e-07;8!UBERON:0000982;2.26e-07;8!UBERON:0004770;2.26e-07;8!UBERON:0001136;4.33e-07;1!UBERON:0001343;4.33e-07;1!UBERON:0004910;4.33e-07;1!UBERON:0004813;4.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.88e-19,3;UBERON:0000043,2.88e-19,3;UBERON:0007845,2.88e-19,3;UBERON:0000415,3.40e-14,4;UBERON:0007240,3.40e-14,4;UBERON:0005742,3.40e-14,4;UBERON:0005734,3.40e-14,4;UBERON:0004664,3.40e-14,4;UBERON:0004663,3.40e-14,4;UBERON:0006915,2.84e-09,3;UBERON:0007616,2.84e-09,3;UBERON:0002217,2.84e-09,3;UBERON:0002018,2.84e-09,3;UBERON:0004797,2.58e-08,7;UBERON:0004457,3.07e-08,12;UBERON:0000042,3.07e-08,12;UBERON:0004872,6.38e-08,83;UBERON:0004905,2.78e-07,8;UBERON:0000982,2.78e-07,8;UBERON:0004770,2.78e-07,8;UBERON:0001136,3.62e-07,1;UBERON:0001343,3.62e-07,1;UBERON:0004910,3.62e-07,1;UBERON:0005154,3.62e-07,1;UBERON:0005295,3.62e-07,1;UBERON:0004813,3.62e-07,1;UBERON:0005297,3.62e-07,1;UBERON:0005294,3.62e-07,1;UBERON:0010141,3.62e-07,1;UBERON:0005891,3.62e-07,1 | |||
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| ||
|short_description=p@chr20:48121333..48121349,- | |short_description=p@chr20:48121333..48121349,- | ||
}} | }} |
Latest revision as of 15:01, 28 July 2015
Short description: | p@chr20:48121333..48121349, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48121333..48121349, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.88e-19 | 3 |
tendon cell | 2.88e-19 | 3 |
cardiac muscle cell | 1.47e-18 | 3 |
cardiac muscle myoblast | 1.47e-18 | 3 |
fibroblast of tunica adventitia of artery | 3.40e-14 | 4 |
fibroblast of the aortic adventitia | 3.40e-14 | 4 |
striated muscle cell | 4.64e-14 | 4 |
mesothelial cell | 3.73e-11 | 19 |
synovial cell | 2.84e-09 | 3 |
omentum preadipocyte | 8.69e-09 | 3 |
mesodermal cell | 4.52e-08 | 121 |
fibroblast | 1.84e-07 | 76 |
stromal cell | 2.55e-07 | 28 |
perirenal adipocyte cell | 3.02e-07 | 1 |
androgen binding protein secreting cell | 3.62e-07 | 1 |
seminiferous tubule epithelial cell | 3.62e-07 | 1 |
Sertoli cell | 3.62e-07 | 1 |
smooth muscle cell of the pulmonary artery | 6.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.88e-19 | 3 |
tendon | 2.88e-19 | 3 |
regular connective tissue | 2.88e-19 | 3 |
artery wall | 3.40e-14 | 4 |
tunica adventitia of artery | 3.40e-14 | 4 |
adventitia | 3.40e-14 | 4 |
tunica adventitia of blood vessel | 3.40e-14 | 4 |
aorta tunica adventitia | 3.40e-14 | 4 |
aorta wall | 3.40e-14 | 4 |
stratified squamous epithelium | 2.84e-09 | 3 |
layer of synovial tissue | 2.84e-09 | 3 |
synovial joint | 2.84e-09 | 3 |
synovial membrane of synovial joint | 2.84e-09 | 3 |
blood vessel layer | 2.58e-08 | 7 |
cavity lining | 3.07e-08 | 12 |
serous membrane | 3.07e-08 | 12 |
splanchnic layer of lateral plate mesoderm | 6.38e-08 | 83 |
articulation | 2.78e-07 | 8 |
skeletal joint | 2.78e-07 | 8 |
articular system | 2.78e-07 | 8 |
mesothelium | 3.62e-07 | 1 |
seminiferous tubule of testis | 3.62e-07 | 1 |
epithelium of male gonad | 3.62e-07 | 1 |
epithelial cord | 3.62e-07 | 1 |
sex cord | 3.62e-07 | 1 |
seminiferous tubule epithelium | 3.62e-07 | 1 |
testis sex cord | 3.62e-07 | 1 |
genital ridge | 3.62e-07 | 1 |
primitive sex cord of indifferent gonad | 3.62e-07 | 1 |
coelomic epithelium | 3.62e-07 | 1 |