FFCP PHASE1:Hg19::chr20:48124130..48124143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48124130..48124143,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48124130..48124143,- | |description=CAGE_peak_at_chr20:48124130..48124143,- | ||
|id=chr20:48124130..48124143,- | |id=chr20:48124130..48124143,- | ||
|ontology_enrichment_celltype=CL:0000055!1.77e-10!180;CL:0000057!6.69e-10!75;CL:0002334!1.89e-09!12;CL:0000359!5.74e-08!32;CL:0002494!5.88e-08!16;CL:0000187!1.27e-07!54;CL:1000306!2.29e-07!4;CL:0002547!2.29e-07!4;CL:0000192!5.06e-07!42;CL:0000514!5.06e-07!42;CL:0000680!6.07e-07!57;CL:0000056!6.07e-07!57;CL:0000355!6.07e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.77e-10!180;CL:0000057!6.69e-10!75;CL:0002334!1.89e-09!12;CL:0000359!5.74e-08!32;CL:0002494!5.88e-08!16;CL:0000187!1.27e-07!54;CL:1000306!2.29e-07!4;CL:0002547!2.29e-07!4;CL:0000192!5.06e-07!42;CL:0000514!5.06e-07!42;CL:0000680!6.07e-07!57;CL:0000056!6.07e-07!57;CL:0000355!6.07e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002615;5.15e-20;3!CL:1000306;2.69e-15;4!CL:0002547;2.69e-15;4!CL:0002593;1.04e-13;2!CL:0002595;3.09e-12;5!CL:0000214;3.75e-10;3!CL:0000135;1.01e-09;3!CL:0000388;1.01e-09;3!CL:0002579;1.15e-09;3!CL:0002580;1.94e-09;3!CL:0002334;8.87e-09;12!CL:0000511;3.93e-08;1!CL:0002625;3.93e-08;1!CL:0000216;3.93e-08;1!CL:0000136;4.12e-08;13!CL:0002174;1.07e-07;1!CL:0002591;1.07e-07;1!CL:0002616;1.07e-07;1!CL:0000501;1.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,7.90e-20,3;CL:1000306,2.98e-15,4;CL:0002547,2.98e-15,4;CL:0002593,2.92e-13,2;CL:0002595,5.62e-12,5;CL:0000214,3.84e-10,3;CL:0000135,7.47e-10,3;CL:0000388,7.47e-10,3;CL:0002579,1.02e-09,3;CL:0002580,1.64e-09,3;CL:0002334,7.68e-09,12;CL:0000511,4.07e-08,1;CL:0002625,4.07e-08,1;CL:0000216,4.07e-08,1;CL:0002616,6.52e-08,1;CL:0002174,1.26e-07,1;CL:0000501,1.26e-07,1;CL:0002591,1.75e-07,1;CL:0000136,4.76e-07,15;CL:0000057,8.24e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.28e-07!14 | |ontology_enrichment_disease=DOID:2394!1.28e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!5.15e-11!6;UBERON:0002358!5.15e-11!6;UBERON:0003684!5.15e-11!6;UBERON:0001178!5.15e-11!6;UBERON:0007100!6.69e-11!27;UBERON:0004872!8.89e-11!84;UBERON:0004458!1.39e-10!49;UBERON:0000948!1.39e-09!24;UBERON:0005498!1.39e-09!24;UBERON:0004140!1.39e-09!24;UBERON:0009881!1.39e-09!24;UBERON:0004141!1.39e-09!24;UBERON:0003084!1.39e-09!24;UBERON:0007005!1.39e-09!24;UBERON:0004139!1.39e-09!24;UBERON:0004291!1.39e-09!24;UBERON:0001637!1.79e-09!42;UBERON:0003509!1.79e-09!42;UBERON:0004572!1.79e-09!42;UBERON:0004573!2.91e-09!33;UBERON:0004571!2.91e-09!33;UBERON:0002323!5.00e-09!46;UBERON:0004457!6.05e-09!12;UBERON:0000042!6.05e-09!12;UBERON:0001009!2.63e-08!113;UBERON:0002385!1.78e-07!63;UBERON:0001015!1.78e-07!63;UBERON:0000383!1.78e-07!63;UBERON:0004535!1.85e-07!110;UBERON:0000415!2.29e-07!4;UBERON:0007240!2.29e-07!4;UBERON:0005742!2.29e-07!4;UBERON:0005734!2.29e-07!4;UBERON:0004664!2.29e-07!4;UBERON:0004663!2.29e-07!4;UBERON:0001134!5.59e-07!61;UBERON:0002036!5.59e-07!61;UBERON:0003082!5.59e-07!61 | |ontology_enrichment_uberon=UBERON:0003688!5.15e-11!6;UBERON:0002358!5.15e-11!6;UBERON:0003684!5.15e-11!6;UBERON:0001178!5.15e-11!6;UBERON:0007100!6.69e-11!27;UBERON:0004872!8.89e-11!84;UBERON:0004458!1.39e-10!49;UBERON:0000948!1.39e-09!24;UBERON:0005498!1.39e-09!24;UBERON:0004140!1.39e-09!24;UBERON:0009881!1.39e-09!24;UBERON:0004141!1.39e-09!24;UBERON:0003084!1.39e-09!24;UBERON:0007005!1.39e-09!24;UBERON:0004139!1.39e-09!24;UBERON:0004291!1.39e-09!24;UBERON:0001637!1.79e-09!42;UBERON:0003509!1.79e-09!42;UBERON:0004572!1.79e-09!42;UBERON:0004573!2.91e-09!33;UBERON:0004571!2.91e-09!33;UBERON:0002323!5.00e-09!46;UBERON:0004457!6.05e-09!12;UBERON:0000042!6.05e-09!12;UBERON:0001009!2.63e-08!113;UBERON:0002385!1.78e-07!63;UBERON:0001015!1.78e-07!63;UBERON:0000383!1.78e-07!63;UBERON:0004535!1.85e-07!110;UBERON:0000415!2.29e-07!4;UBERON:0007240!2.29e-07!4;UBERON:0005742!2.29e-07!4;UBERON:0005734!2.29e-07!4;UBERON:0004664!2.29e-07!4;UBERON:0004663!2.29e-07!4;UBERON:0001134!5.59e-07!61;UBERON:0002036!5.59e-07!61;UBERON:0003082!5.59e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.85e-35;9!UBERON:0000042;4.85e-35;9!UBERON:0003688;7.06e-27;6!UBERON:0002358;7.06e-27;6!UBERON:0003684;7.06e-27;6!UBERON:0001178;7.06e-27;6!UBERON:0004797;2.69e-15;4!UBERON:0000415;2.69e-15;4!UBERON:0007240;2.69e-15;4!UBERON:0005742;2.69e-15;4!UBERON:0005734;2.69e-15;4!UBERON:0004664;2.69e-15;4!UBERON:0004663;2.69e-15;4!UBERON:0002456;1.04e-13;2!UBERON:0003834;3.09e-12;5!UBERON:0001533;3.09e-12;5!UBERON:0004573;6.91e-11;33!UBERON:0004571;6.91e-11;33!UBERON:0006915;3.75e-10;3!UBERON:0007616;3.75e-10;3!UBERON:0002217;3.75e-10;3!UBERON:0002018;3.75e-10;3!UBERON:0007846;1.01e-09;3!UBERON:0000043;1.01e-09;3!UBERON:0007845;1.01e-09;3!UBERON:0001637;4.07e-09;42!UBERON:0003509;4.07e-09;42!UBERON:0004572;4.07e-09;42!UBERON:0003513;7.01e-09;7!UBERON:0001136;3.93e-08;1!UBERON:0001343;3.93e-08;1!UBERON:0004910;3.93e-08;1!UBERON:0004813;3.93e-08;1!UBERON:0002135;1.07e-07;1!UBERON:0000947;1.63e-07;21!UBERON:0010191;1.63e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.58e-27,6;UBERON:0002358,8.58e-27,6;UBERON:0003684,8.58e-27,6;UBERON:0001178,8.58e-27,6;UBERON:0004457,5.06e-26,12;UBERON:0000042,5.06e-26,12;UBERON:0000415,2.98e-15,4;UBERON:0007240,2.98e-15,4;UBERON:0005742,2.98e-15,4;UBERON:0005734,2.98e-15,4;UBERON:0004664,2.98e-15,4;UBERON:0004663,2.98e-15,4;UBERON:0004797,4.89e-15,7;UBERON:0002456,2.92e-13,2;UBERON:0003834,5.62e-12,5;UBERON:0001533,5.62e-12,5;UBERON:0004573,2.53e-11,33;UBERON:0004571,2.53e-11,33;UBERON:0001637,6.83e-11,42;UBERON:0003509,6.83e-11,42;UBERON:0004572,6.83e-11,42;UBERON:0004872,1.76e-10,83;UBERON:0006915,3.84e-10,3;UBERON:0007616,3.84e-10,3;UBERON:0002217,3.84e-10,3;UBERON:0002018,3.84e-10,3;UBERON:0004923,5.86e-10,66;UBERON:0007846,7.47e-10,3;UBERON:0000043,7.47e-10,3;UBERON:0007845,7.47e-10,3;UBERON:0007500,4.11e-09,59;UBERON:0001981,4.11e-09,59;UBERON:0004537,4.11e-09,59;UBERON:0006965,4.11e-09,59;UBERON:0003513,1.07e-08,7;UBERON:0001136,4.07e-08,1;UBERON:0001343,4.07e-08,1;UBERON:0004910,4.07e-08,1;UBERON:0005154,4.07e-08,1;UBERON:0005295,4.07e-08,1;UBERON:0004813,4.07e-08,1;UBERON:0005297,4.07e-08,1;UBERON:0005294,4.07e-08,1;UBERON:0010141,4.07e-08,1;UBERON:0005891,4.07e-08,1;UBERON:0002135,9.72e-08,1;UBERON:0000055,1.10e-07,68;UBERON:0000947,1.47e-07,21;UBERON:0010191,1.47e-07,21;UBERON:0004458,1.83e-07,49 | |||
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|short_description=p@chr20:48124130..48124143,- | |short_description=p@chr20:48124130..48124143,- | ||
}} | }} |
Latest revision as of 15:02, 28 July 2015
Short description: | p@chr20:48124130..48124143, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48124130..48124143, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 7.90e-20 | 3 |
fibroblast of tunica adventitia of artery | 2.98e-15 | 4 |
fibroblast of the aortic adventitia | 2.98e-15 | 4 |
smooth muscle cell of the internal thoracic artery | 2.92e-13 | 2 |
smooth muscle cell of the subclavian artery | 5.62e-12 | 5 |
synovial cell | 3.84e-10 | 3 |
fibrocyte | 7.47e-10 | 3 |
tendon cell | 7.47e-10 | 3 |
omentum preadipocyte | 1.02e-09 | 3 |
preadipocyte of the breast | 1.64e-09 | 3 |
preadipocyte | 7.68e-09 | 12 |
androgen binding protein secreting cell | 4.07e-08 | 1 |
seminiferous tubule epithelial cell | 4.07e-08 | 1 |
Sertoli cell | 4.07e-08 | 1 |
perirenal adipocyte cell | 6.52e-08 | 1 |
follicular cell of ovary | 1.26e-07 | 1 |
granulosa cell | 1.26e-07 | 1 |
smooth muscle cell of the pulmonary artery | 1.75e-07 | 1 |
fat cell | 4.76e-07 | 15 |
fibroblast | 8.24e-07 | 76 |