FFCP PHASE1:Hg19::chr20:48129753..48129781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:48129753..48129781,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48129753..48129781,- | |||
|id=chr20:48129753..48129781,- | |||
|ontology_enrichment_celltype=CL:0002334!4.82e-11!12;CL:0000055!7.91e-11!180;CL:0000057!9.08e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.09e-15;3!CL:0002615;5.30e-15;3!CL:0002334;2.36e-14;12!CL:1000306;3.62e-12;4!CL:0002547;3.62e-12;4!CL:0000214;4.66e-08;3!CL:0002580;2.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,9.47e-16,3;CL:0002615,7.48e-15,3;CL:0002334,2.01e-14,12;CL:1000306,3.92e-12,4;CL:0002547,3.92e-12,4;CL:0000214,4.59e-08,3;CL:0002580,2.42e-07,3;CL:0000057,6.36e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.39e-10!6;UBERON:0002358!3.39e-10!6;UBERON:0003684!3.39e-10!6;UBERON:0001178!3.39e-10!6;UBERON:0000948!1.36e-09!24;UBERON:0005498!1.36e-09!24;UBERON:0004140!1.36e-09!24;UBERON:0009881!1.36e-09!24;UBERON:0004141!1.36e-09!24;UBERON:0003084!1.36e-09!24;UBERON:0007005!1.36e-09!24;UBERON:0004139!1.36e-09!24;UBERON:0004291!1.36e-09!24;UBERON:0004872!3.31e-08!84;UBERON:0004457!3.52e-08!12;UBERON:0000042!3.52e-08!12;UBERON:0007100!4.29e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.24e-34;9!UBERON:0000042;2.24e-34;9!UBERON:0003688;6.58e-29;6!UBERON:0002358;6.58e-29;6!UBERON:0003684;6.58e-29;6!UBERON:0001178;6.58e-29;6!UBERON:0004797;3.62e-12;4!UBERON:0000415;3.62e-12;4!UBERON:0007240;3.62e-12;4!UBERON:0005742;3.62e-12;4!UBERON:0005734;3.62e-12;4!UBERON:0004664;3.62e-12;4!UBERON:0004663;3.62e-12;4!UBERON:0004458;3.83e-09;48!UBERON:0006915;4.66e-08;3!UBERON:0007616;4.66e-08;3!UBERON:0002217;4.66e-08;3!UBERON:0002018;4.66e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.09e-29,6;UBERON:0002358,8.09e-29,6;UBERON:0003684,8.09e-29,6;UBERON:0001178,8.09e-29,6;UBERON:0004457,2.00e-25,12;UBERON:0000042,2.00e-25,12;UBERON:0000415,3.92e-12,4;UBERON:0007240,3.92e-12,4;UBERON:0005742,3.92e-12,4;UBERON:0005734,3.92e-12,4;UBERON:0004664,3.92e-12,4;UBERON:0004663,3.92e-12,4;UBERON:0004458,4.33e-12,49;UBERON:0002323,8.79e-09,46;UBERON:0003886,9.06e-09,54;UBERON:0006915,4.59e-08,3;UBERON:0007616,4.59e-08,3;UBERON:0002217,4.59e-08,3;UBERON:0002018,4.59e-08,3;UBERON:0002553,1.57e-07,61;UBERON:0004797,4.10e-07,7;UBERON:0004923,4.80e-07,66 | |||
|phase1_expression=1.63510541343501,0.856402095563933,1.55049844505568,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.2663051166458,0,12.0471380714502,3.90135220418193,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,1.20036438433761,0.206105058476878,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,0.871533458600294,7.79789331220045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0.173767228936166,0,0,0,0,0,0,0,0,1.98486246255021,0.153461973288062,1.12264037773229,2.94720043288112,2.55853624533352,1.44768529029247,2.96836132889982,0,0.532685175939381,0.0821271560138091,0,0.232420756919918,0,0,0,0.574072240823034,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.74129687641568,0.715624433709956,0,0,0,0,0,0.95460974377781,0,0.179872457583315,0,0.117812402345686,0.808729926293264,0,0,0,0.243713489631284,0,0.136499911407986,1.1312434556297,1.13008116620243,1.65409603063837,3.3171948762061,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,4.85547561184627,8.56166721695745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0.933118762985422,0,0,0,1.479651084554,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.640358984218058,2.19790570540343,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.558564802544508,0.458320848023367,0.717873024576814,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,2.21922344601045,0,0.50313580350515,0,0.228840068396924,1.20984739010591,0,0.147855149989634,0,0,0.155262956876259,1.24411862352257,0.265841714557995,0,1.6528336989694,2.66563648518157,0,0,0.537052785212442,1.39210127963548,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0.428883182749851,0,0,0,0,0,0,6.35923743778251,0,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,1.47088993052343,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,0.432626562123789,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.603821380773079,0 | |phase1_expression=1.63510541343501,0.856402095563933,1.55049844505568,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.2663051166458,0,12.0471380714502,3.90135220418193,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,1.20036438433761,0.206105058476878,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,0.871533458600294,7.79789331220045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0.173767228936166,0,0,0,0,0,0,0,0,1.98486246255021,0.153461973288062,1.12264037773229,2.94720043288112,2.55853624533352,1.44768529029247,2.96836132889982,0,0.532685175939381,0.0821271560138091,0,0.232420756919918,0,0,0,0.574072240823034,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.74129687641568,0.715624433709956,0,0,0,0,0,0.95460974377781,0,0.179872457583315,0,0.117812402345686,0.808729926293264,0,0,0,0.243713489631284,0,0.136499911407986,1.1312434556297,1.13008116620243,1.65409603063837,3.3171948762061,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,4.85547561184627,8.56166721695745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0.933118762985422,0,0,0,1.479651084554,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.640358984218058,2.19790570540343,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.558564802544508,0.458320848023367,0.717873024576814,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,2.21922344601045,0,0.50313580350515,0,0.228840068396924,1.20984739010591,0,0.147855149989634,0,0,0.155262956876259,1.24411862352257,0.265841714557995,0,1.6528336989694,2.66563648518157,0,0,0.537052785212442,1.39210127963548,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0.428883182749851,0,0,0,0,0,0,6.35923743778251,0,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,1.47088993052343,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,0.432626562123789,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.603821380773079,0 | ||
|short_description=p@chr20:48129753..48129781,- | |||
}} | }} |
Latest revision as of 15:02, 28 July 2015
Short description: | p@chr20:48129753..48129781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48129753..48129781, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 9.47e-16 | 3 |
adipocyte of omentum tissue | 7.48e-15 | 3 |
preadipocyte | 2.01e-14 | 12 |
fibroblast of tunica adventitia of artery | 3.92e-12 | 4 |
fibroblast of the aortic adventitia | 3.92e-12 | 4 |
synovial cell | 4.59e-08 | 3 |
preadipocyte of the breast | 2.42e-07 | 3 |
fibroblast | 6.36e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.09e-29 | 6 |
peritoneum | 8.09e-29 | 6 |
abdominal cavity | 8.09e-29 | 6 |
visceral peritoneum | 8.09e-29 | 6 |
cavity lining | 2.00e-25 | 12 |
serous membrane | 2.00e-25 | 12 |
artery wall | 3.92e-12 | 4 |
tunica adventitia of artery | 3.92e-12 | 4 |
adventitia | 3.92e-12 | 4 |
tunica adventitia of blood vessel | 3.92e-12 | 4 |
aorta tunica adventitia | 3.92e-12 | 4 |
aorta wall | 3.92e-12 | 4 |
body cavity or lining | 4.33e-12 | 49 |
body cavity | 8.79e-09 | 46 |
body cavity precursor | 9.06e-09 | 54 |
stratified squamous epithelium | 4.59e-08 | 3 |
layer of synovial tissue | 4.59e-08 | 3 |
synovial joint | 4.59e-08 | 3 |
synovial membrane of synovial joint | 4.59e-08 | 3 |
anatomical cavity | 1.57e-07 | 61 |
blood vessel layer | 4.10e-07 | 7 |
organ component layer | 4.80e-07 | 66 |