FFCP PHASE1:Hg19::chr20:48164416..48164441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48164416..48164441,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48164416..48164441,- | |description=CAGE_peak_at_chr20:48164416..48164441,- | ||
|id=chr20:48164416..48164441,- | |id=chr20:48164416..48164441,- | ||
|ontology_enrichment_celltype=CL:0000055!3.48e-12!180;CL:0000359!3.29e-11!32;CL:0000187!3.33e-10!54;CL:0000192!8.08e-10!42;CL:0000514!8.08e-10!42;CL:0000680!2.98e-09!57;CL:0000056!2.98e-09!57;CL:0000355!2.98e-09!57;CL:0000393!4.17e-09!60;CL:0000211!4.17e-09!60;CL:0000183!1.12e-08!59;CL:0002494!1.87e-07!16;CL:0002334!2.34e-07!12;CL:0000057!3.33e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.48e-12!180;CL:0000359!3.29e-11!32;CL:0000187!3.33e-10!54;CL:0000192!8.08e-10!42;CL:0000514!8.08e-10!42;CL:0000680!2.98e-09!57;CL:0000056!2.98e-09!57;CL:0000355!2.98e-09!57;CL:0000393!4.17e-09!60;CL:0000211!4.17e-09!60;CL:0000183!1.12e-08!59;CL:0002494!1.87e-07!16;CL:0002334!2.34e-07!12;CL:0000057!3.33e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002579;4.05e-13;3!CL:1000306;2.00e-09;4!CL:0002547;2.00e-09;4!CL:0002596;7.52e-09;2!CL:0002334;2.42e-08;12!CL:0002595;4.89e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.82e-13,3;CL:1000306,2.13e-09,4;CL:0002547,2.13e-09,4;CL:0002596,7.85e-09,2;CL:0002334,2.42e-08,12;CL:0002595,4.29e-08,5;CL:0000214,9.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!9.01e-13!84;UBERON:0007100!9.54e-12!27;UBERON:0001637!1.60e-11!42;UBERON:0003509!1.60e-11!42;UBERON:0004572!1.60e-11!42;UBERON:0000948!7.53e-11!24;UBERON:0005498!7.53e-11!24;UBERON:0004140!7.53e-11!24;UBERON:0009881!7.53e-11!24;UBERON:0004141!7.53e-11!24;UBERON:0003084!7.53e-11!24;UBERON:0007005!7.53e-11!24;UBERON:0004139!7.53e-11!24;UBERON:0004291!7.53e-11!24;UBERON:0002385!3.37e-10!63;UBERON:0001015!3.37e-10!63;UBERON:0000383!3.37e-10!63;UBERON:0004573!6.82e-10!33;UBERON:0004571!6.82e-10!33;UBERON:0001134!8.50e-10!61;UBERON:0002036!8.50e-10!61;UBERON:0003082!8.50e-10!61;UBERON:0001009!2.04e-09!113;UBERON:0003688!9.01e-09!6;UBERON:0002358!9.01e-09!6;UBERON:0003684!9.01e-09!6;UBERON:0001178!9.01e-09!6;UBERON:0004535!1.05e-08!110;UBERON:0004457!2.60e-08!12;UBERON:0000042!2.60e-08!12;UBERON:0001981!2.79e-08!60;UBERON:0007500!2.79e-08!60;UBERON:0004537!2.79e-08!60;UBERON:0006965!2.79e-08!60;UBERON:0004290!2.91e-08!70;UBERON:0000486!2.22e-07!82;UBERON:0004458!2.72e-07!49;UBERON:0002049!2.85e-07!79;UBERON:0007798!2.85e-07!79;UBERON:0003914!3.97e-07!118 | |ontology_enrichment_uberon=UBERON:0004872!9.01e-13!84;UBERON:0007100!9.54e-12!27;UBERON:0001637!1.60e-11!42;UBERON:0003509!1.60e-11!42;UBERON:0004572!1.60e-11!42;UBERON:0000948!7.53e-11!24;UBERON:0005498!7.53e-11!24;UBERON:0004140!7.53e-11!24;UBERON:0009881!7.53e-11!24;UBERON:0004141!7.53e-11!24;UBERON:0003084!7.53e-11!24;UBERON:0007005!7.53e-11!24;UBERON:0004139!7.53e-11!24;UBERON:0004291!7.53e-11!24;UBERON:0002385!3.37e-10!63;UBERON:0001015!3.37e-10!63;UBERON:0000383!3.37e-10!63;UBERON:0004573!6.82e-10!33;UBERON:0004571!6.82e-10!33;UBERON:0001134!8.50e-10!61;UBERON:0002036!8.50e-10!61;UBERON:0003082!8.50e-10!61;UBERON:0001009!2.04e-09!113;UBERON:0003688!9.01e-09!6;UBERON:0002358!9.01e-09!6;UBERON:0003684!9.01e-09!6;UBERON:0001178!9.01e-09!6;UBERON:0004535!1.05e-08!110;UBERON:0004457!2.60e-08!12;UBERON:0000042!2.60e-08!12;UBERON:0001981!2.79e-08!60;UBERON:0007500!2.79e-08!60;UBERON:0004537!2.79e-08!60;UBERON:0006965!2.79e-08!60;UBERON:0004290!2.91e-08!70;UBERON:0000486!2.22e-07!82;UBERON:0004458!2.72e-07!49;UBERON:0002049!2.85e-07!79;UBERON:0007798!2.85e-07!79;UBERON:0003914!3.97e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.04e-21;9!UBERON:0000042;1.04e-21;9!UBERON:0003688;8.06e-17;6!UBERON:0002358;8.06e-17;6!UBERON:0003684;8.06e-17;6!UBERON:0001178;8.06e-17;6!UBERON:0004797;2.00e-09;4!UBERON:0000415;2.00e-09;4!UBERON:0007240;2.00e-09;4!UBERON:0005742;2.00e-09;4!UBERON:0005734;2.00e-09;4!UBERON:0004664;2.00e-09;4!UBERON:0004663;2.00e-09;4!UBERON:0005396;7.52e-09;2!UBERON:0003834;4.89e-08;5!UBERON:0001533;4.89e-08;5!UBERON:0004573;2.16e-07;33!UBERON:0004571;2.16e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.71e-17,6;UBERON:0002358,9.71e-17,6;UBERON:0003684,9.71e-17,6;UBERON:0001178,9.71e-17,6;UBERON:0004457,5.23e-16,12;UBERON:0000042,5.23e-16,12;UBERON:0000415,2.13e-09,4;UBERON:0007240,2.13e-09,4;UBERON:0005742,2.13e-09,4;UBERON:0005734,2.13e-09,4;UBERON:0004664,2.13e-09,4;UBERON:0004663,2.13e-09,4;UBERON:0004797,5.32e-09,7;UBERON:0005396,7.85e-09,2;UBERON:0004872,2.20e-08,83;UBERON:0004573,3.07e-08,33;UBERON:0004571,3.07e-08,33;UBERON:0003834,4.29e-08,5;UBERON:0001533,4.29e-08,5;UBERON:0004458,9.23e-08,49;UBERON:0001637,1.53e-07,42;UBERON:0003509,1.53e-07,42;UBERON:0004572,1.53e-07,42;UBERON:0006915,9.09e-07,3;UBERON:0007616,9.09e-07,3;UBERON:0002217,9.09e-07,3;UBERON:0002018,9.09e-07,3 | |||
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|short_description=p@chr20:48164416..48164441,- | |short_description=p@chr20:48164416..48164441,- | ||
}} | }} |
Latest revision as of 15:02, 28 July 2015
Short description: | p@chr20:48164416..48164441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48164416..48164441, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.82e-13 | 3 |
fibroblast of tunica adventitia of artery | 2.13e-09 | 4 |
fibroblast of the aortic adventitia | 2.13e-09 | 4 |
smooth muscle cell of the carotid artery | 7.85e-09 | 2 |
preadipocyte | 2.42e-08 | 12 |
smooth muscle cell of the subclavian artery | 4.29e-08 | 5 |
synovial cell | 9.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.71e-17 | 6 |
peritoneum | 9.71e-17 | 6 |
abdominal cavity | 9.71e-17 | 6 |
visceral peritoneum | 9.71e-17 | 6 |
cavity lining | 5.23e-16 | 12 |
serous membrane | 5.23e-16 | 12 |
artery wall | 2.13e-09 | 4 |
tunica adventitia of artery | 2.13e-09 | 4 |
adventitia | 2.13e-09 | 4 |
tunica adventitia of blood vessel | 2.13e-09 | 4 |
aorta tunica adventitia | 2.13e-09 | 4 |
aorta wall | 2.13e-09 | 4 |
blood vessel layer | 5.32e-09 | 7 |
carotid artery segment | 7.85e-09 | 2 |
splanchnic layer of lateral plate mesoderm | 2.20e-08 | 83 |
systemic artery | 3.07e-08 | 33 |
systemic arterial system | 3.07e-08 | 33 |
thoracic segment blood vessel | 4.29e-08 | 5 |
subclavian artery | 4.29e-08 | 5 |
body cavity or lining | 9.23e-08 | 49 |
artery | 1.53e-07 | 42 |
arterial blood vessel | 1.53e-07 | 42 |
arterial system | 1.53e-07 | 42 |
stratified squamous epithelium | 9.09e-07 | 3 |
layer of synovial tissue | 9.09e-07 | 3 |
synovial joint | 9.09e-07 | 3 |
synovial membrane of synovial joint | 9.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.26e-07 | 14 |