FFCP PHASE1:Hg19::chr20:48164416..48164441,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:48164416..48164441,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48164416..48164441,- | |||
|id=chr20:48164416..48164441,- | |||
|ontology_enrichment_celltype=CL:0000055!3.48e-12!180;CL:0000359!3.29e-11!32;CL:0000187!3.33e-10!54;CL:0000192!8.08e-10!42;CL:0000514!8.08e-10!42;CL:0000680!2.98e-09!57;CL:0000056!2.98e-09!57;CL:0000355!2.98e-09!57;CL:0000393!4.17e-09!60;CL:0000211!4.17e-09!60;CL:0000183!1.12e-08!59;CL:0002494!1.87e-07!16;CL:0002334!2.34e-07!12;CL:0000057!3.33e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002579;4.05e-13;3!CL:1000306;2.00e-09;4!CL:0002547;2.00e-09;4!CL:0002596;7.52e-09;2!CL:0002334;2.42e-08;12!CL:0002595;4.89e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.82e-13,3;CL:1000306,2.13e-09,4;CL:0002547,2.13e-09,4;CL:0002596,7.85e-09,2;CL:0002334,2.42e-08,12;CL:0002595,4.29e-08,5;CL:0000214,9.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!9.01e-13!84;UBERON:0007100!9.54e-12!27;UBERON:0001637!1.60e-11!42;UBERON:0003509!1.60e-11!42;UBERON:0004572!1.60e-11!42;UBERON:0000948!7.53e-11!24;UBERON:0005498!7.53e-11!24;UBERON:0004140!7.53e-11!24;UBERON:0009881!7.53e-11!24;UBERON:0004141!7.53e-11!24;UBERON:0003084!7.53e-11!24;UBERON:0007005!7.53e-11!24;UBERON:0004139!7.53e-11!24;UBERON:0004291!7.53e-11!24;UBERON:0002385!3.37e-10!63;UBERON:0001015!3.37e-10!63;UBERON:0000383!3.37e-10!63;UBERON:0004573!6.82e-10!33;UBERON:0004571!6.82e-10!33;UBERON:0001134!8.50e-10!61;UBERON:0002036!8.50e-10!61;UBERON:0003082!8.50e-10!61;UBERON:0001009!2.04e-09!113;UBERON:0003688!9.01e-09!6;UBERON:0002358!9.01e-09!6;UBERON:0003684!9.01e-09!6;UBERON:0001178!9.01e-09!6;UBERON:0004535!1.05e-08!110;UBERON:0004457!2.60e-08!12;UBERON:0000042!2.60e-08!12;UBERON:0001981!2.79e-08!60;UBERON:0007500!2.79e-08!60;UBERON:0004537!2.79e-08!60;UBERON:0006965!2.79e-08!60;UBERON:0004290!2.91e-08!70;UBERON:0000486!2.22e-07!82;UBERON:0004458!2.72e-07!49;UBERON:0002049!2.85e-07!79;UBERON:0007798!2.85e-07!79;UBERON:0003914!3.97e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.04e-21;9!UBERON:0000042;1.04e-21;9!UBERON:0003688;8.06e-17;6!UBERON:0002358;8.06e-17;6!UBERON:0003684;8.06e-17;6!UBERON:0001178;8.06e-17;6!UBERON:0004797;2.00e-09;4!UBERON:0000415;2.00e-09;4!UBERON:0007240;2.00e-09;4!UBERON:0005742;2.00e-09;4!UBERON:0005734;2.00e-09;4!UBERON:0004664;2.00e-09;4!UBERON:0004663;2.00e-09;4!UBERON:0005396;7.52e-09;2!UBERON:0003834;4.89e-08;5!UBERON:0001533;4.89e-08;5!UBERON:0004573;2.16e-07;33!UBERON:0004571;2.16e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.71e-17,6;UBERON:0002358,9.71e-17,6;UBERON:0003684,9.71e-17,6;UBERON:0001178,9.71e-17,6;UBERON:0004457,5.23e-16,12;UBERON:0000042,5.23e-16,12;UBERON:0000415,2.13e-09,4;UBERON:0007240,2.13e-09,4;UBERON:0005742,2.13e-09,4;UBERON:0005734,2.13e-09,4;UBERON:0004664,2.13e-09,4;UBERON:0004663,2.13e-09,4;UBERON:0004797,5.32e-09,7;UBERON:0005396,7.85e-09,2;UBERON:0004872,2.20e-08,83;UBERON:0004573,3.07e-08,33;UBERON:0004571,3.07e-08,33;UBERON:0003834,4.29e-08,5;UBERON:0001533,4.29e-08,5;UBERON:0004458,9.23e-08,49;UBERON:0001637,1.53e-07,42;UBERON:0003509,1.53e-07,42;UBERON:0004572,1.53e-07,42;UBERON:0006915,9.09e-07,3;UBERON:0007616,9.09e-07,3;UBERON:0002217,9.09e-07,3;UBERON:0002018,9.09e-07,3 | |||
|phase1_expression=0.908391896352783,1.2846031433459,1.40954404095971,2.00146596706261,0.446961094427288,5.23403114460221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.767175371061182,0,0.50133791063589,0.579386075843295,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.8994576749687,0.264818361626438,3.44203944898576,1.06400514659507,1.12135520028461,2.1349799145941,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.389748020644795,0,0.644349290496095,1.45481451136931,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,5.12446941001296,3.48613383440118,8.59767724165691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.535286966391485,0,0,0.300946099727719,4.5481500811197,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,1.48864684691266,0.61384789315225,4.2099014164961,4.22859192543813,2.04682899626681,2.73451665944133,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0.229628896329213,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0.94443704049192,0,0.616067160352178,0.532306030317022,0,0.9266210955196,2.00374841438788,0.372158369359667,0.316379424718726,0,0,0,1.27281299170375,2.35484592059769,0,0.274537029736055,0,0.202182481573316,0,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0.424216295861138,1.13008116620243,4.41092274836899,2.65375590096488,2.19225442626881,0,0,0,0.6196469961995,0.281695602532241,0,0,0.7133421029625,0,4.85547561184627,5.92730807327823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.796991953004279,0,0,0,0,1.55519793830904,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0.664653872707185,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.85381197895741,5.39485945871752,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14882720709979,0,0.837847203816763,1.14580212005842,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.447764408660622,0.233713309847224,1.10961172300523,0,0.251567901752575,1.77962244319307,0,1.51230923763239,0,0.591420599958536,0,0,0.465788870628778,2.07353103920428,0.265841714557995,0.521745061811734,1.50257608997218,4.95046775819434,0,0,0.537052785212442,2.32016879939247,1.19428766609585,0,0.343395705182793,0.336749488765919,0,0,0.857766365499703,0.260994291965212,0,0,0,0,0.617602894321944,5.70138528904638,0,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0,0,0,1.71603825227734,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,2.60396512716726,0.924351257262837,3.46101249699031,0,0,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0,0.639701945702943,0,0,0,0,0,0,0.435433495793923,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,1.99727032255654,0.201273793591026,0 | |||
|short_description=p@chr20:48164416..48164441,- | |||
}} |
Latest revision as of 15:02, 28 July 2015
Short description: | p@chr20:48164416..48164441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48164416..48164441, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.82e-13 | 3 |
fibroblast of tunica adventitia of artery | 2.13e-09 | 4 |
fibroblast of the aortic adventitia | 2.13e-09 | 4 |
smooth muscle cell of the carotid artery | 7.85e-09 | 2 |
preadipocyte | 2.42e-08 | 12 |
smooth muscle cell of the subclavian artery | 4.29e-08 | 5 |
synovial cell | 9.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.71e-17 | 6 |
peritoneum | 9.71e-17 | 6 |
abdominal cavity | 9.71e-17 | 6 |
visceral peritoneum | 9.71e-17 | 6 |
cavity lining | 5.23e-16 | 12 |
serous membrane | 5.23e-16 | 12 |
artery wall | 2.13e-09 | 4 |
tunica adventitia of artery | 2.13e-09 | 4 |
adventitia | 2.13e-09 | 4 |
tunica adventitia of blood vessel | 2.13e-09 | 4 |
aorta tunica adventitia | 2.13e-09 | 4 |
aorta wall | 2.13e-09 | 4 |
blood vessel layer | 5.32e-09 | 7 |
carotid artery segment | 7.85e-09 | 2 |
splanchnic layer of lateral plate mesoderm | 2.20e-08 | 83 |
systemic artery | 3.07e-08 | 33 |
systemic arterial system | 3.07e-08 | 33 |
thoracic segment blood vessel | 4.29e-08 | 5 |
subclavian artery | 4.29e-08 | 5 |
body cavity or lining | 9.23e-08 | 49 |
artery | 1.53e-07 | 42 |
arterial blood vessel | 1.53e-07 | 42 |
arterial system | 1.53e-07 | 42 |
stratified squamous epithelium | 9.09e-07 | 3 |
layer of synovial tissue | 9.09e-07 | 3 |
synovial joint | 9.09e-07 | 3 |
synovial membrane of synovial joint | 9.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.26e-07 | 14 |