FFCP PHASE1:Hg19::chr20:6020266..6020281,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:6020266..6020281,- | |||
|coexpression_cluster_id=C548 | |||
|description=CAGE_peak_at_chr20:6020266..6020281,- | |description=CAGE_peak_at_chr20:6020266..6020281,- | ||
|id=chr20:6020266..6020281,- | |id=chr20:6020266..6020281,- | ||
|ontology_enrichment_celltype=CL:0000077!1.88e-12!19;CL:0002195!1.41e-08!2;CL:0002571!1.41e-08!2;CL:0002535!2.59e-08!2;CL:1000507!3.93e-08!12;CL:1000494!3.93e-08!12;CL:1000497!2.11e-07!18;CL:0002518!2.11e-07!18 | |ontology_enrichment_celltype=CL:0000077!1.88e-12!19;CL:0002195!1.41e-08!2;CL:0002571!1.41e-08!2;CL:0002535!2.59e-08!2;CL:1000507!3.93e-08!12;CL:1000494!3.93e-08!12;CL:1000497!2.11e-07!18;CL:0002518!2.11e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.84e-17;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.09e-17,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.65e-18!27;DOID:193!4.78e-17!29;DOID:2394!2.33e-13!14;DOID:4468!4.91e-09!2 | |ontology_enrichment_disease=DOID:120!1.65e-18!27;DOID:193!4.78e-17!29;DOID:2394!2.33e-13!14;DOID:4468!4.91e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.80e-23;14!DOID:120;2.18e-18;27!DOID:193;3.90e-17;29!DOID:4468;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.57e-23,14;DOID:120,2.10e-18,27;DOID:193,3.77e-17,29;DOID:4468,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000992!2.56e-10!13;UBERON:0006955!2.59e-08!2;UBERON:0004801!2.59e-08!2;UBERON:0006554!3.02e-08!44;UBERON:0009773!3.93e-08!12;UBERON:0001231!3.93e-08!12;UBERON:0004810!3.93e-08!12;UBERON:0001008!5.13e-08!45;UBERON:0002113!6.91e-08!27;UBERON:0003918!6.91e-08!27;UBERON:0005095!6.91e-08!27;UBERON:0007687!6.91e-08!27;UBERON:0005172!1.44e-07!55;UBERON:0005173!1.44e-07!55;UBERON:0003064!6.16e-07!37;UBERON:0003134!8.28e-07!37;UBERON:0000474!8.28e-07!37;UBERON:0005156!9.48e-07!59;UBERON:0000990!9.48e-07!59 | |ontology_enrichment_uberon=UBERON:0000992!2.56e-10!13;UBERON:0006955!2.59e-08!2;UBERON:0004801!2.59e-08!2;UBERON:0006554!3.02e-08!44;UBERON:0009773!3.93e-08!12;UBERON:0001231!3.93e-08!12;UBERON:0004810!3.93e-08!12;UBERON:0001008!5.13e-08!45;UBERON:0002113!6.91e-08!27;UBERON:0003918!6.91e-08!27;UBERON:0005095!6.91e-08!27;UBERON:0007687!6.91e-08!27;UBERON:0005172!1.44e-07!55;UBERON:0005173!1.44e-07!55;UBERON:0003064!6.16e-07!37;UBERON:0003134!8.28e-07!37;UBERON:0000474!8.28e-07!37;UBERON:0005156!9.48e-07!59;UBERON:0000990!9.48e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.03e-16;5!UBERON:0000992;5.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,8.82e-17,5;UBERON:0000992,4.95e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,3.31583314765545,0,5.89840647974137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.308061348417659,0,0,0.73886140225013,0,0,0,0,0,0.501689773854853,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0,0.465788870628778,0,0,0,2.40412174395549,1.52322084867518,1.62748293281865,0,1.18151612746737,0,0,0,0,0,0,0,0.643324774124777,0,0.226705925512272,0,0,0,1.23520578864389,1.09642024789354,0,0.578742114812744,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,3.60348418641188,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,3.31583314765545,0,5.89840647974137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.308061348417659,0,0,0.73886140225013,0,0,0,0,0,0.501689773854853,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0,0.465788870628778,0,0,0,2.40412174395549,1.52322084867518,1.62748293281865,0,1.18151612746737,0,0,0,0,0,0,0,0.643324774124777,0,0.226705925512272,0,0,0,1.23520578864389,1.09642024789354,0,0.578742114812744,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,3.60348418641188,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:6020266..6020281,- | |short_description=p@chr20:6020266..6020281,- | ||
}} | }} |
Latest revision as of 16:03, 28 July 2015
Short description: | p@chr20:6020266..6020281, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:6020266..6020281, - |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.09e-17 | 19 |
Ontology term | p-value | n |
---|---|---|
right ovary | 8.82e-17 | 5 |
female gonad | 4.95e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.57e-23 | 14 |
female reproductive organ cancer | 2.10e-18 | 27 |
reproductive organ cancer | 3.77e-17 | 29 |
clear cell adenocarcinoma | 4.52e-11 | 2 |