FFCP PHASE1:Hg19::chr21:28336890..28336913,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:28336890..28336913,- to FFCP PHASE1:Hg19::chr21:28336890..28336913,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:28336890..28336913,- | |||
|coexpression_cluster_id=C1486 | |||
|description=CAGE_peak_at_chr21:28336890..28336913,- | |||
|id=chr21:28336890..28336913,- | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-14!180;CL:0002620!1.38e-14!23;CL:0000057!4.62e-12!75;CL:0000680!2.44e-07!57;CL:0000056!2.44e-07!57;CL:0000355!2.44e-07!57;CL:0000183!5.15e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.34e-42;23!CL:0002591;1.10e-13;1!CL:0000057;9.93e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.00e-42,23;CL:0000057,1.76e-18,76;CL:0002591,1.42e-13,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.90e-09!5;DOID:450!2.90e-09!5;DOID:66!2.90e-09!5;DOID:423!2.90e-09!5;DOID:0080000!2.90e-09!5;DOID:11722!2.90e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.25e-23;5!DOID:450;5.25e-23;5!DOID:66;5.25e-23;5!DOID:423;5.25e-23;5!DOID:0080000;5.25e-23;5!DOID:11722;5.25e-23;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.75e-23,5;DOID:450,3.75e-23,5;DOID:66,3.75e-23,5;DOID:423,3.75e-23,5;DOID:0080000,3.75e-23,5;DOID:11722,3.75e-23,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.38e-10!45;UBERON:0002416!1.38e-10!45;UBERON:0002097!8.71e-09!40;UBERON:0002385!2.21e-08!63;UBERON:0001015!2.21e-08!63;UBERON:0000383!2.21e-08!63;UBERON:0001134!2.93e-07!61;UBERON:0002036!2.93e-07!61;UBERON:0003082!2.93e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.33e-15;41!UBERON:0002199;2.73e-12;46!UBERON:0002416;2.73e-12;46!UBERON:0003102;2.13e-09;50!UBERON:0000078;1.75e-07;2!UBERON:0002012;1.75e-07;2!UBERON:0008886;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.36e-23,41;UBERON:0002199,6.28e-21,46;UBERON:0002416,6.28e-21,46;UBERON:0003102,2.26e-11,99;UBERON:0000078,1.99e-07,2;UBERON:0007497,1.99e-07,2;UBERON:0003643,1.99e-07,2;UBERON:0003504,1.99e-07,2;UBERON:0003469,1.99e-07,2;UBERON:0003496,1.99e-07,2;UBERON:0002012,1.99e-07,2;UBERON:0008886,1.99e-07,2;UBERON:0007303,1.99e-07,2;UBERON:0002061,1.99e-07,2;UBERON:0005432,1.99e-07,2;UBERON:0004363,1.99e-07,2 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.0176865831006,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,3.20336083227851,1.48352330811693,0.600182192168805,1.23663035086127,1.03056216018252,1.48893485065272,0.675105328965065,0.292311015483596,0.757301322732344,2.30124746605748,1.13152239773168,3.19508633264953,1.41052937518696,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,1.32969058292435,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.459257792658427,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.193341436584244,0.616194468458578,0.460511024178389,0,0.537101224341368,0.145016693914229,0.340906509664404,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0.95460974377781,0,0.359744915166629,1.09814811894422,0.589062011728432,0,0,0,0,0,0,0.545999645631943,0.565621727814851,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.597019211547496,0,0.554805861502613,0.757612021100357,0.251567901752575,0,0.457680136793847,0.453692771289717,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0,0 | |phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.0176865831006,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,3.20336083227851,1.48352330811693,0.600182192168805,1.23663035086127,1.03056216018252,1.48893485065272,0.675105328965065,0.292311015483596,0.757301322732344,2.30124746605748,1.13152239773168,3.19508633264953,1.41052937518696,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,1.32969058292435,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.459257792658427,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.193341436584244,0.616194468458578,0.460511024178389,0,0.537101224341368,0.145016693914229,0.340906509664404,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0.95460974377781,0,0.359744915166629,1.09814811894422,0.589062011728432,0,0,0,0,0,0,0.545999645631943,0.565621727814851,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.597019211547496,0,0.554805861502613,0.757612021100357,0.251567901752575,0,0.457680136793847,0.453692771289717,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0,0 | ||
|short_description=p@chr21:28336890..28336913,- | |||
}} | }} |
Latest revision as of 17:06, 28 July 2015
Short description: | p@chr21:28336890..28336913, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:28336890..28336913, - |
Coexpression cluster: | C1486_Fibroblast_Mesenchymal_Hair_mesenchymal_Preadipocyte_Smooth_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.00e-42 | 23 |
fibroblast | 1.76e-18 | 76 |
smooth muscle cell of the pulmonary artery | 1.42e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.36e-23 | 41 |
integument | 6.28e-21 | 46 |
integumental system | 6.28e-21 | 46 |
surface structure | 2.26e-11 | 99 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.99e-07 | 2 |
developing epithelial placode | 1.99e-07 | 2 |
respiratory system arterial blood vessel | 1.99e-07 | 2 |
respiratory system blood vessel | 1.99e-07 | 2 |
respiratory system artery | 1.99e-07 | 2 |
head blood vessel | 1.99e-07 | 2 |
pulmonary artery | 1.99e-07 | 2 |
pulmonary vascular system | 1.99e-07 | 2 |
pharyngeal vasculature | 1.99e-07 | 2 |
truncus arteriosus | 1.99e-07 | 2 |
aortic sac | 1.99e-07 | 2 |
pharyngeal arch artery | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.75e-23 | 5 |
myotonic disease | 3.75e-23 | 5 |
muscle tissue disease | 3.75e-23 | 5 |
myopathy | 3.75e-23 | 5 |
muscular disease | 3.75e-23 | 5 |
myotonic dystrophy | 3.75e-23 | 5 |