FFCP PHASE1:Hg19::chr21:39627657..39627671,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:39627657..39627671,+ | |||
|coexpression_cluster_id=C641 | |coexpression_cluster_id=C641 | ||
|description=CAGE_peak_at_chr21:39627657..39627671,+ | |description=CAGE_peak_at_chr21:39627657..39627671,+ | ||
|id=chr21:39627657..39627671,+ | |id=chr21:39627657..39627671,+ | ||
|ontology_enrichment_celltype=CL:0000860;6.96e-85;33!CL:0002057;6.96e-85;33!CL:0000473;9.65e-58;39!CL:0000234;9.65e-58;39!CL:0000576;2.03e-40;48!CL:0000766;7.56e-23;69!CL:0000763;2.37e-18;100!CL:0002087;1.03e-13;104!CL:0000738;2.79e-10;136 | |ontology_enrichment_celltype=CL:0002057!4.58e-80!42;CL:0000860!3.19e-74!45;CL:0002194!4.13e-57!63;CL:0000576!4.13e-57!63;CL:0000040!4.13e-57!63;CL:0000559!4.13e-57!63;CL:0000766!3.73e-56!76;CL:0002009!3.87e-55!65;CL:0000839!1.07e-50!70;CL:0000557!6.98e-50!71;CL:0000763!1.43e-35!112;CL:0000049!1.43e-35!112;CL:0000738!7.85e-27!140;CL:0002087!9.09e-27!119;CL:0002031!2.21e-25!124;CL:0002032!1.58e-21!165;CL:0000837!1.58e-21!165;CL:0000037!2.56e-20!172;CL:0000566!2.56e-20!172;CL:0000988!9.44e-19!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;6.96e-85;33!CL:0002057;6.96e-85;33!CL:0000473;9.65e-58;39!CL:0000234;9.65e-58;39!CL:0000576;2.03e-40;48!CL:0000766;7.56e-23;69!CL:0000763;2.37e-18;100!CL:0002087;1.03e-13;104!CL:0000738;2.79e-10;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.06e-74,42;CL:0002057,4.06e-74,42;CL:0000473,1.43e-64,48;CL:0000234,1.43e-64,48;CL:0000766,6.72e-52,72;CL:0002194,3.37e-51,59;CL:0000576,3.37e-51,59;CL:0000040,3.37e-51,59;CL:0000559,3.37e-51,59;CL:0002009,1.79e-49,61;CL:0000839,1.32e-45,66;CL:0000557,6.68e-45,67;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0000738,1.66e-26,136;CL:0002087,2.56e-25,115;CL:0002031,3.61e-24,120;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-56;42!CL:0000049;1.06e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.85e-43!80;UBERON:0002390!2.40e-42!102;UBERON:0003061!2.40e-42!102;UBERON:0001474!6.48e-40!86;UBERON:0002193!7.76e-38!112;UBERON:0004765!3.84e-35!101;UBERON:0001434!3.84e-35!101;UBERON:0002405!5.82e-28!115;UBERON:0002204!3.46e-18!167;UBERON:0003081!1.31e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.24e-39,76;UBERON:0001474,2.34e-36,82;UBERON:0004765,5.98e-33,90;UBERON:0002405,8.06e-32,93;UBERON:0002390,4.33e-30,98;UBERON:0003061,4.33e-30,98;UBERON:0001434,1.91e-29,100;UBERON:0002193,4.19e-27,108;UBERON:0002204,1.08e-16,167;UBERON:0003081,2.77e-13,203;UBERON:0002384,4.95e-08,371;UBERON:0000926,1.34e-07,315;UBERON:0004120,1.34e-07,315;UBERON:0006603,1.34e-07,315 | |||
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|short_description=p@chr21:39627657..39627671,+ | |short_description=p@chr21:39627657..39627671,+ | ||
}} | }} |
Latest revision as of 17:49, 28 July 2015
Short description: | p@chr21:39627657..39627671, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39627657..39627671, + |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.06e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.06e-74 | 42 |
defensive cell | 1.43e-64 | 48 |
phagocyte | 1.43e-64 | 48 |
myeloid leukocyte | 6.72e-52 | 72 |
monopoietic cell | 3.37e-51 | 59 |
monocyte | 3.37e-51 | 59 |
monoblast | 3.37e-51 | 59 |
promonocyte | 3.37e-51 | 59 |
macrophage dendritic cell progenitor | 1.79e-49 | 61 |
myeloid lineage restricted progenitor cell | 1.32e-45 | 66 |
granulocyte monocyte progenitor cell | 6.68e-45 | 67 |
myeloid cell | 5.86e-34 | 108 |
common myeloid progenitor | 5.86e-34 | 108 |
leukocyte | 1.66e-26 | 136 |
nongranular leukocyte | 2.56e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 3.61e-24 | 120 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.24e-39 | 76 |
bone element | 2.34e-36 | 82 |
skeletal element | 5.98e-33 | 90 |
immune system | 8.06e-32 | 93 |
hematopoietic system | 4.33e-30 | 98 |
blood island | 4.33e-30 | 98 |
skeletal system | 1.91e-29 | 100 |
hemolymphoid system | 4.19e-27 | 108 |
musculoskeletal system | 1.08e-16 | 167 |
lateral plate mesoderm | 2.77e-13 | 203 |
connective tissue | 4.95e-08 | 371 |
mesoderm | 1.34e-07 | 315 |
mesoderm-derived structure | 1.34e-07 | 315 |
presumptive mesoderm | 1.34e-07 | 315 |