FFCP PHASE1:Hg19::chr21:39670125..39670140,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:39670125..39670140,+ | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_at_chr21:39670125..39670140,+ | |description=CAGE_peak_at_chr21:39670125..39670140,+ | ||
|id=chr21:39670125..39670140,+ | |id=chr21:39670125..39670140,+ | ||
|ontology_enrichment_celltype=CL:0000349!7.44e-10!3;CL:0002577!7.44e-10!3;CL:0002536!3.54e-07!2;CL:0002334!6.38e-07!12 | |ontology_enrichment_celltype=CL:0000349!7.44e-10!3;CL:0002577!7.44e-10!3;CL:0002536!3.54e-07!2;CL:0002334!6.38e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.94e-51;19!CL:0002536;1.86e-31;2!CL:0002537;3.19e-28;5!CL:0002577;1.29e-21;3!CL:1000415;4.18e-09;2!CL:0002097;5.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.21e-50,19;CL:0002536,1.37e-31,2;CL:0002537,3.66e-28,5;CL:0002577,1.43e-21,3;CL:1000415,4.34e-09,2;CL:0002097,4.70e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.54e-20!14;UBERON:0000158!7.54e-20!14;UBERON:0001737!5.06e-14!9;UBERON:0000305!7.21e-11!7;UBERON:0003124!1.25e-10!7;UBERON:0000478!1.38e-10!24;UBERON:0004871!1.91e-09!8;UBERON:0001557!1.05e-07!19;UBERON:0001987!1.84e-07!4;UBERON:0004340!1.84e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.84e-54;10!UBERON:0000158;1.84e-54;10!UBERON:0000305;1.90e-54;7!UBERON:0000478;4.40e-40;24!UBERON:0001987;1.79e-16;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.65e-69,14;UBERON:0000158,7.65e-69,14;UBERON:0000305,1.80e-54,7;UBERON:0004871,1.06e-47,8;UBERON:0000478,5.14e-40,24;UBERON:0003124,3.02e-20,7;UBERON:0001987,1.93e-16,4;UBERON:0004340,1.93e-16,4;UBERON:0004923,3.22e-14,66 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,1.39560233594486,4.80571018686379,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.482022059766964,0.330881918197182,0.217879444092406,0,0.269662616320329,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,2.42502057157008,11.6504807657348,0.907170879989041,0.248107807818777,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,29.3995034024312,1.22864280839693,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0.638002319463839,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,4.30213042016567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.601030435988874,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,2.78774068787403,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:39670125..39670140,+ | |short_description=p@chr21:39670125..39670140,+ | ||
}} | }} |
Latest revision as of 17:52, 28 July 2015
Short description: | p@chr21:39670125..39670140, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39670125..39670140, + |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.21e-50 | 19 |
amniotic epithelial cell | 1.37e-31 | 2 |
amnion mesenchymal stem cell | 3.66e-28 | 5 |
placental epithelial cell | 1.43e-21 | 3 |
epithelial cell of gall bladder | 4.34e-09 | 2 |
cortical cell of adrenal gland | 4.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.65e-69 | 14 |
membranous layer | 7.65e-69 | 14 |
amnion | 1.80e-54 | 7 |
somatic layer of lateral plate mesoderm | 1.06e-47 | 8 |
extraembryonic structure | 5.14e-40 | 24 |
chorion | 3.02e-20 | 7 |
placenta | 1.93e-16 | 4 |
allantois | 1.93e-16 | 4 |
organ component layer | 3.22e-14 | 66 |