FFCP PHASE1:Hg19::chr21:46294651..46294656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:46294651..46294656,+ | |||
|coexpression_cluster_id=C2495 | |||
|description=CAGE_peak_at_chr21:46294651..46294656,+ | |||
|id=chr21:46294651..46294656,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.69e-56!42;CL:0000860!5.31e-52!45;CL:0000766!9.30e-40!76;CL:0002009!2.87e-38!65;CL:0002194!1.72e-35!63;CL:0000576!1.72e-35!63;CL:0000040!1.72e-35!63;CL:0000559!1.72e-35!63;CL:0000557!9.19e-35!71;CL:0000839!1.24e-31!70;CL:0000763!1.84e-28!112;CL:0000049!1.84e-28!112;CL:0000738!1.77e-26!140;CL:0002087!1.74e-21!119;CL:0000037!9.42e-21!172;CL:0000566!9.42e-21!172;CL:0000988!2.26e-19!182;CL:0002031!2.16e-18!124;CL:0002032!5.25e-18!165;CL:0000837!5.25e-18!165;CL:0000775!1.22e-10!3;CL:0000842!4.73e-10!3;CL:0000094!1.13e-08!8;CL:0000134!1.70e-08!358;CL:0002320!3.06e-08!365;CL:0000224!9.46e-08!4;CL:0000219!2.43e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.08e-27;3!CL:0000094;6.67e-23;8!CL:0000081;7.28e-17;11!CL:0000766;9.09e-16;69!CL:0000576;7.50e-15;48!CL:0002393;3.04e-14;6!CL:0002397;3.04e-14;6!CL:0000860;2.18e-13;33!CL:0002057;2.18e-13;33!CL:0000771;3.52e-11;2!CL:0000473;4.86e-10;39!CL:0000234;4.86e-10;39!CL:0000763;6.09e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.08e-27,3;CL:0000766,1.14e-26,72;CL:0000860,6.71e-23,42;CL:0002057,6.71e-23,42;CL:0000094,6.93e-23,8;CL:0000473,5.04e-20,48;CL:0000234,5.04e-20,48;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0000081,7.48e-17,11;CL:0002194,5.45e-16,59;CL:0000576,5.45e-16,59;CL:0000040,5.45e-16,59;CL:0000559,5.45e-16,59;CL:0002009,1.81e-15,61;CL:0000839,2.67e-14,66;CL:0000557,4.36e-14,67;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000771,3.70e-11,2;CL:0000988,1.07e-10,177;CL:0002393,7.74e-10,9;CL:0002397,7.74e-10,9;CL:0002087,3.81e-08,115;CL:0002031,8.53e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-16;42!CL:0000049;6.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.78e-30!80;UBERON:0002390!1.77e-28!102;UBERON:0003061!1.77e-28!102;UBERON:0001474!4.12e-28!86;UBERON:0002193!1.36e-25!112;UBERON:0004765!2.06e-23!101;UBERON:0001434!2.06e-23!101;UBERON:0002405!4.04e-20!115;UBERON:0002204!1.09e-12!167;UBERON:0003081!2.55e-11!216;UBERON:0002171!3.33e-08!1;UBERON:0006518!3.33e-08!1;UBERON:0008949!3.33e-08!1;UBERON:0000101!3.33e-08!1;UBERON:0002167!3.33e-08!1;UBERON:0002384!6.81e-08!375;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.05e-12,76;UBERON:0001474,1.68e-11,82;UBERON:0004765,1.82e-10,90;UBERON:0002405,4.01e-10,93;UBERON:0002390,1.34e-09,98;UBERON:0003061,1.34e-09,98;UBERON:0001434,2.11e-09,100;UBERON:0002193,1.09e-08,108 | |||
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|short_description=p@chr21:46294651..46294656,+ | |||
}} | }} |
Latest revision as of 18:32, 28 July 2015
Short description: | p@chr21:46294651..46294656, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46294651..46294656, + |
Coexpression cluster: | C2495_Neutrophils_CD14_Eosinophils_immature_Natural_CD8_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.08e-27 | 3 |
myeloid leukocyte | 1.14e-26 | 72 |
classical monocyte | 6.71e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.71e-23 | 42 |
granulocyte | 6.93e-23 | 8 |
defensive cell | 5.04e-20 | 48 |
phagocyte | 5.04e-20 | 48 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
blood cell | 7.48e-17 | 11 |
monopoietic cell | 5.45e-16 | 59 |
monocyte | 5.45e-16 | 59 |
monoblast | 5.45e-16 | 59 |
promonocyte | 5.45e-16 | 59 |
macrophage dendritic cell progenitor | 1.81e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.67e-14 | 66 |
granulocyte monocyte progenitor cell | 4.36e-14 | 67 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
eosinophil | 3.70e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
intermediate monocyte | 7.74e-10 | 9 |
CD14-positive, CD16-positive monocyte | 7.74e-10 | 9 |
nongranular leukocyte | 3.81e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.53e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.05e-12 | 76 |
bone element | 1.68e-11 | 82 |
skeletal element | 1.82e-10 | 90 |
immune system | 4.01e-10 | 93 |
hematopoietic system | 1.34e-09 | 98 |
blood island | 1.34e-09 | 98 |
skeletal system | 2.11e-09 | 100 |
hemolymphoid system | 1.09e-08 | 108 |