FFCP PHASE1:Hg19::chr22:23237875..23237897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:23237875..23237897,+ | |||
|coexpression_cluster_id=C481 | |||
|description=CAGE_peak_at_chr22:23237875..23237897,+ | |description=CAGE_peak_at_chr22:23237875..23237897,+ | ||
|id=chr22:23237875..23237897,+ | |id=chr22:23237875..23237897,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.91e-14!24;CL:0000826!4.91e-14!24;CL:0000236!8.38e-13!14 | |ontology_enrichment_celltype=CL:0000945!4.91e-14!24;CL:0000826!4.91e-14!24;CL:0000236!8.38e-13!14 | ||
|ontology_enrichment_celltype_v019=CL:0000785;4.25e-14;1!CL:0000819;4.25e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,4.53e-14,1;CL:0000785,1.12e-07,2;CL:0000955,1.12e-07,2;CL:0000818,1.12e-07,2;CL:0000954,1.12e-07,2;CL:0000816,1.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.24e-14;1!UBERON:0001045;1.33e-13;1!UBERON:0005425;1.33e-13;1!UBERON:0004872;6.07e-08;7!CL:0000954;1.09e-07;2!UBERON:0006965;1.93e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.50e-09!10 | |ontology_enrichment_disease=DOID:0060058!2.50e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.25e-14;1!DOID:8675;4.25e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.53e-14,1;DOID:8675,4.53e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.65e-24!115;UBERON:0002106!5.11e-12!3;UBERON:0004854!5.11e-12!3;UBERON:0009034!5.11e-12!3;UBERON:0002095!5.11e-12!3;UBERON:0004782!5.11e-12!3;UBERON:0003281!5.11e-12!3;UBERON:0009664!5.11e-12!3;UBERON:0002296!5.11e-12!3;UBERON:0005602!5.11e-12!3;UBERON:0001179!5.11e-12!3;UBERON:0006293!5.11e-12!3;UBERON:0001829!6.85e-09!2;UBERON:0004177!1.27e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.08e-14;1!UBERON:0002171;3.50e-14;1!UBERON:0006518;3.50e-14;1!UBERON:0008949;3.50e-14;1!UBERON:0000101;3.50e-14;1!UBERON:0002167;3.50e-14;1!UBERON:0001736;6.24e-14;1!UBERON:0002372;1.33e-13;1!UBERON:0001154;1.33e-13;1!UBERON:0000941;1.33e-13;1!UBERON:0001153;1.33e-13;1!UBERON:0001785;1.33e-13;1!UBERON:0002464;1.33e-13;1!UBERON:0004904;1.33e-13;1!UBERON:0009854;1.33e-13;1!UBERON:0001961;1.33e-13;1!UBERON:0001021;1.33e-13;1!UBERON:0001744;1.33e-13;1!UBERON:0001042;1.33e-13;1!UBERON:0001735;1.33e-13;1!UBERON:0001155;5.76e-13;9!UBERON:0000059;1.03e-10;11!UBERON:0004921;4.87e-08;33!UBERON:0000341;1.32e-07;2!UBERON:0001829;1.32e-07;2!UBERON:0006562;1.93e-07;2!UBERON:0003714;1.93e-07;2!UBERON:0005162;1.93e-07;2!UBERON:0000122;1.93e-07;2!UBERON:0000160;9.48e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.08e-14,1;UBERON:0007023,3.21e-14,114;UBERON:0002171,3.50e-14,1;UBERON:0006518,3.50e-14,1;UBERON:0008949,3.50e-14,1;UBERON:0000101,3.50e-14,1;UBERON:0002167,3.50e-14,1;UBERON:0001736,7.55e-14,1;UBERON:0006298,7.55e-14,1;UBERON:0001154,9.73e-14,1;UBERON:0001153,9.73e-14,1;UBERON:0001045,9.73e-14,1;UBERON:0002372,1.10e-13,1;UBERON:0001961,1.10e-13,1;UBERON:0001744,1.10e-13,1;UBERON:0001735,1.10e-13,1;UBERON:0000941,1.25e-13,1;UBERON:0001785,1.25e-13,1;UBERON:0002464,1.25e-13,1;UBERON:0004904,1.25e-13,1;UBERON:0001021,1.25e-13,1;UBERON:0003902,1.25e-13,1;UBERON:0005425,1.25e-13,1;UBERON:0001155,5.20e-13,9;UBERON:0000059,9.44e-11,11;UBERON:0005409,7.62e-08,25;UBERON:0000341,1.28e-07,2;UBERON:0001829,1.45e-07,2;UBERON:0003714,1.87e-07,2;UBERON:0005162,1.87e-07,2;UBERON:0000122,1.87e-07,2;UBERON:0000160,9.02e-07,17 | |||
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| ||
|short_description=p@chr22:23237875..23237897,+ | |short_description=p@chr22:23237875..23237897,+ | ||
}} | }} |
Latest revision as of 19:27, 28 July 2015
Short description: | p@chr22:23237875..23237897, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:23237875..23237897, + |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 4.53e-14 | 1 |
mature B cell | 1.12e-07 | 2 |
pre-B-II cell | 1.12e-07 | 2 |
transitional stage B cell | 1.12e-07 | 2 |
small pre-B-II cell | 1.12e-07 | 2 |
immature B cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.08e-14 | 1 |
adult organism | 3.21e-14 | 114 |
lower lobe of right lung | 3.50e-14 | 1 |
right lung lobe | 3.50e-14 | 1 |
lower lobe of lung | 3.50e-14 | 1 |
lobe of lung | 3.50e-14 | 1 |
right lung | 3.50e-14 | 1 |
submandibular gland | 7.55e-14 | 1 |
submandibular gland primordium | 7.55e-14 | 1 |
vermiform appendix | 9.73e-14 | 1 |
caecum | 9.73e-14 | 1 |
midgut | 9.73e-14 | 1 |
tonsil | 1.10e-13 | 1 |
mucosa-associated lymphoid tissue | 1.10e-13 | 1 |
lymphoid tissue | 1.10e-13 | 1 |
tonsillar ring | 1.10e-13 | 1 |
cranial nerve II | 1.25e-13 | 1 |
cranial nerve | 1.25e-13 | 1 |
nerve trunk | 1.25e-13 | 1 |
nerve connecting eye with brain | 1.25e-13 | 1 |
nerve | 1.25e-13 | 1 |
retinal neural layer | 1.25e-13 | 1 |
presumptive neural retina | 1.25e-13 | 1 |
colon | 5.20e-13 | 9 |
large intestine | 9.44e-11 | 11 |
gastrointestinal system | 7.62e-08 | 25 |
throat | 1.28e-07 | 2 |
major salivary gland | 1.45e-07 | 2 |
neural tissue | 1.87e-07 | 2 |
multi cell component structure | 1.87e-07 | 2 |
neuron projection bundle | 1.87e-07 | 2 |
intestine | 9.02e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.53e-14 | 1 |
lymphosarcoma | 4.53e-14 | 1 |