FFCP PHASE1:Hg19::chr22:43023683..43023702,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:43023683..43023702,- | |||
|coexpression_cluster_id=C2647 | |||
|description=CAGE_peak_at_chr22:43023683..43023702,- | |||
|id=chr22:43023683..43023702,- | |||
|ontology_enrichment_celltype=CL:0000055!5.47e-16!180;CL:0000057!2.64e-14!75;CL:0002371!1.68e-10!591;CL:0000048!1.39e-08!430;CL:0000723!3.06e-08!436;CL:0000144!1.01e-07!625;CL:0000034!2.48e-07!444;CL:0000192!7.22e-07!42;CL:0000514!7.22e-07!42;CL:0000183!9.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.88e-07;73!CL:0002334;7.09e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-16,76;CL:0000048,1.18e-10,427;CL:0000723,6.28e-10,433;CL:0000034,5.18e-09,441;CL:0000192,3.83e-07,43;CL:0000514,3.83e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.54e-09!659;UBERON:0005256!8.13e-08!143;UBERON:0000914!1.01e-07!83;UBERON:0002329!1.01e-07!83;UBERON:0003077!1.01e-07!83;UBERON:0003059!1.01e-07!83;UBERON:0007282!1.01e-07!83;UBERON:0009618!1.01e-07!83;UBERON:0007285!1.01e-07!83;UBERON:0003102!2.38e-07!95;UBERON:0004290!5.72e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.87e-07;6!UBERON:0002358;1.87e-07;6!UBERON:0003684;1.87e-07;6!UBERON:0001178;1.87e-07;6!UBERON:0004457;2.53e-07;9!UBERON:0000042;2.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.80e-09,78;UBERON:0005256,4.30e-08,122;UBERON:0002049,5.44e-08,78;UBERON:0007798,5.44e-08,78;UBERON:0000926,8.86e-08,315;UBERON:0004120,8.86e-08,315;UBERON:0006603,8.86e-08,315;UBERON:0000055,1.76e-07,68;UBERON:0003688,2.25e-07,6;UBERON:0002358,2.25e-07,6;UBERON:0003684,2.25e-07,6;UBERON:0001178,2.25e-07,6;UBERON:0003104,3.02e-07,160;UBERON:0009142,3.02e-07,160;UBERON:0007524,3.36e-07,73;UBERON:0002329,4.77e-07,71;UBERON:0003059,4.77e-07,71;UBERON:0007282,4.77e-07,71;UBERON:0004290,4.77e-07,71;UBERON:0009618,4.77e-07,71;UBERON:0003077,8.33e-07,72;UBERON:0007285,8.33e-07,72 | |||
|phase1_expression=3.81524596468169,10.9191267184401,4.08767771878316,15.0109947529696,3.5756887554183,8.72338524100369,5.06599756336621,0.631719873426831,1.82829939739887,1.72013755551056,2.09340350391728,0.436882744260345,1.31883489114227,1.23766352960047,1.65698687863958,6.72325146451775,1.20538905604795,2.92124036154949,0.487932798790507,0.369363174230364,2.24400760368678,0.626909442956176,0,0.273748850145768,1.25542639594803,1.22261449196722,0.821005894499457,0.865818594450472,0,0.383829398097213,0.154816123316076,1.83884244895785,1.204823675113,1.10926203050036,0.154934401160603,0.142169232487422,0.293600439334847,0.553995408531877,0.802177789880567,0,0.223915474239924,0.32389366601898,0,0.726991193897824,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.709446689665756,1.03423704220986,0,0,2.25890807451126,0.272906150057846,0.674170453335254,1.22433556948361,0.641858054152187,0.639337125799041,0.989553900560148,0.398927315243264,0,0.870627715885752,1.13477044938228,0.622822248995575,1.25624332628372,1.5644487552606,0.868755378820466,1.81619850790011,0.368277635987565,0,0.422510572623884,0.425208599930087,0.419317291016752,0.336985893439485,0.150176892841506,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.501559486172034,0,0,0,0.111410456885174,0,0.221533894583621,0,0.512365278902701,0.390178042679635,0.657751618414705,0,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0.255725123687061,1.80719576192283,1.00267582127178,2.89693037921647,0,1.94653948121054,0.189069634328136,1.99556457716308,0.614843499851882,0.458426764241994,0.364295288292542,1.11235332835329,0,0.348259474598534,0.398873881556595,0.238490624305342,0,0,0,0,0.347140501607594,0,1.25849830862972,1.92582629358047,1.25396979922086,1.29208379584664,1.06729878806013,1.00416183829401,0,2.28081631715554,0.732186172644509,0.367663080345869,1.62028389576352,0.357198913136319,0.44905874525234,0,0,0.949265659568129,0.732806975721629,0,0,0.872188104285069,2.98183171017191,2.27934920996244,0.397227542439656,1.14734648299525,2.12801029319014,1.12135520028461,1.06748995729705,2.71334303258876,0.622422070799533,1.75123873690594,0.817309515567294,1.81628913173918,0.576175924479999,0.234321431833797,1.5608003841516,1.1409436430889,1.34503812496621,0.939475989150119,0.647491777472526,1.96631129383148,1.63323337003915,1.22834317311768,1.75653827998801,2.37600571456411,2.47266929278557,1.82032272387605,5.74894513452991,0.336672227908132,2.12701483782339,0.831192346452549,0,4.29082914118628,0.901428353439581,0.340296549480063,2.69084453533293,2.13557388818567,1.05965950579781,0.900273288253207,1.23663035086127,2.06112432036503,2.60563598864226,0.843881661206331,2.33848812386877,1.26216887122057,1.74894807420369,1.93975268182574,2.13005755509969,2.11579406278045,1.01736355386293,0,0.272746120590835,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,0.310983165046111,0.756962552626885,0,1.56449532329816,3.21620469096443,0,3.25057549622385,2.16563844500876,0.354920400119532,0.168584690078102,0.723033089650446,0.441175890929576,0.435758888184812,0.237270619111097,0.539325232640658,0.784885860501384,0.769494313892781,1.4763109092493,0,1.2347220339942,2.94017422771084,1.26755034821831,0.982827216677626,1.18157981336281,0.882926198829301,0.614942192715568,0.343135620597051,0.439001141634502,0,0.100528972411631,0.648119116109707,0.325808305310325,2.07986957055916,0,0.231860809950154,0.352226082707465,1.29929802984966,1.38895653772983,2.47330397904978,0.790204397959275,0,0.246217006087397,0,0.445893486866185,0.93733833986777,0.671928512795438,0.141775097242386,0.268675568108545,0.581267877027924,1.15014803749563,2.46331618947972,0.264145302039678,0.829312462163088,0.144119953416961,0.37872730027914,0.380987365753014,1.90994212779139,1.17217447210047,1.71072446022705,0.822619941626588,0.600686115687835,3.14409075893636,0.897048674762886,0.87192013766656,0.36669142910475,0.775630294546667,7.15312891703765,0.845302752556,1.06375246633948,1.04007436911366,1.80045161983499,0,1.3321108950805,1.28680194292333,2.17048642156577,0,0.325736184293735,1.06617584622764,0.791951872933429,1.20575750823834,0,1.19967589418468,3.64871341923571,0,2.10833939483032,2.87549826589899,1.14861935834114,0,1.44781306667579,2.67119219315498,1.25342674267927,0.112085143993527,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,1.10422342547226,1.50051156317903,1.35632511849868,1.66376689224646,3.92543775353756,2.05013139544115,1.7571212248907,0.601892199455438,13.6444502433591,1.03473071292505,0,1.29058417979192,0.955719759148911,2.15381273209015,1.71571711905428,0,0.647142602455851,0.640365346820666,0.606255142892519,3.32870879020994,3.0239029332968,2.72918588600655,2.14846762603287,8.70046292742528,7.04765320906355,5.11707249066703,5.14732547659544,13.3576259800492,0.771048469013278,1.06537035187876,0.410635780069046,1.55776328755086,1.16210378459959,0.483437798366489,2.6065841139427,0.644566922551274,1.37777337797528,1.82091168006717,1.83574180943194,0,0.15403067420883,0.784349769176855,0,0,1.13733384070897,1.36074964221213,1.51141141271498,0,1.35473218771926,2.00675909541941,0.254876273045038,1.66215201785745,0.671624264166535,0.219259876645935,0.261435451024901,0.256450125116389,1.64007322849853,0,0.515205058238611,0.27470839445503,0.082509499920588,1.14853107599234,3.25030123018261,3.21367859688319,0.386682873168488,0.924291702687866,0.614014698904518,1.24052915236078,0.751941714077915,1.59518363305651,1.02271952899321,0.356128142586949,1.32227932288782,0.768760269460425,0,0.4046311234222,4.18360994367557,1.25924938732256,0,0.616067160352178,1.06461206063404,0,1.11194531462352,0.286249773483982,1.48863347743867,0.949138274156178,2.09693213316207,1.27948895655667,0.855877976067841,0.636406495851874,1.56989728039846,1.43897966066652,3.0199073270966,1.64937363283961,0.404364963146632,1.58510321173008,0.421258456238981,0.48763373908959,1.46228093778771,4.22600587027022,0.818999468447914,2.68670320712054,3.39024349860728,0,1.99031692572366,4.38450885253763,1.73632660280006,1.31178950409327,1.21746226177622,1.54911749049875,2.25356482025793,0.430234056612155,0.589494246078727,2.1400263088875,0.354761064070598,3.16661452946496,1.97576935775941,0.75894634753143,1.39973888097993,0.192444225451024,0,1.08890984861323,0.470719003883896,0.86101074534246,0,2.21715076768338,0.689170200620878,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.640944426764839,0,0.735120647943095,0.371606350251437,0.144269212976445,0,0.318852545457645,0.59873811429845,0.5745161103971,0.211673582723883,0,0,0.228234679033192,0.47003968731907,0,0.50787533340481,0.321176150207399,0.80719882876419,0.425846237690326,0.343505344755765,0.614481528616916,0.447352215784832,0.166849141711909,1.17232857241224,0,0,1.08182271390393,0,0,0,0.73254089635947,0.242721043499027,0.334330152832435,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0.422008249231538,0.667852230137435,0,0,2.98871982376605,0.276283915531148,0,0.102268682502155,0.369254416383208,7.46495010388338,0.179736702294654,0.179021174675609,0.511572370226872,0.591860433821602,0,0,0,0.649376687132959,0,0.520855522170466,0,1.44999915086959,0.227586896570999,0.254253650292766,0.472775363535873,0,0,0.173624994933292,0.885741385813839,0.844175070377856,0,0.552896299656123,0.591095237907095,0.438770794307945,0.21787692703798,0,0.846452843541768,0.227884111694002,0,0.179515288819544,0,2.23300811812344,1.19076871422421,2.13213910407454,0,0,0.166211681900156,0.225595660617181,0.392125068635479,0.503464760927528,0.189753732724185,0,3.37596903244843,0.489698424477443,0.282706142867882,0,0,0.0884575645033392,0,0,0.247127877893006,0.208843899010911,0.202203398942031,0,0.234264445725339,0.729819156862664,0,0.242780379534093,2.76209081994573,1.20990716048664,1.22429104652196,0.252746318513952,0,0.414752765588989,0,0,0.313932918407225,0,0,0.416024019039416,1.38847790668105,0.0979923974143777,0.261177619741208,0.34945333648406,1.0319161948297,0.580537987734511,0.146178634172371,0.328461828212837,0.581934098930517,0,0.90392296312213,0.411125773940253,0.19871461170299,0.253243183823515,0,0.881747022766871,0.426905989478705,0.19980960958213,0.432271251462318,0.114536596165916,0.343189995723929,0.288109595976299,0.124252535565433,0.707082103850386,0.135904206073614,0.104602846312333,0.611989305817931,0.866851769704557,0,0.547621515567972,0,1.28929632425987,0.525774708558629,1.95497680890578,1.83328339209347,0,0.798716001995964,3.43380838509257,0.223171457441873,0.403100834920358,1.44119953416961,0,1.10296455230113,0.741742725430498,0.741438982396034,0.196854963029498,0.169346664131569,0.795229689809303,1.63444087333891,0.321506296930038,0.412618309791701,0.415440338029185,0.2249738915515,0,0.182248669974074,0.670869375198532,0.945668487590378,0.104909176269996,0,0.537862017998534,0.191915197319445,1.42939065274673,0,0.25426853765475,3.80099721227599,0.864221491201268,2.93928624098468,1.19730191562487,0,1.5334921960688,0.453248366080503,0.439656701034247,0,0.646414781807753,0.26446520348538,0.171086837884329,0,0.106787412567695,0.471612915298998,1.24271716604159,0.496166021811951,0.197611631897944,1.09613338542806,0,1.08803560673895,0.7520696820681,0,0.327872630709804,0,0,1.95242023843141,0.1251909307065,0.573409195690071,0.443716206147409,0.558867626472451,0.415045904808692,0.249960815924213,0.758245587708239,0.570930667089935,1.17632909849086,0.936669811613763,0.28984205722165,1.19403842309499,0.467426619694449,0.554805861502613,1.32582103692562,1.50940741051545,2.66943366478961,1.14420034198462,1.66354016139563,1.24349760466224,1.18284119991707,1.11507737014592,0.899606224327209,0.465788870628778,1.65882483136342,1.06336685823198,1.04349012362347,1.35231848097497,4.18885733385675,0.813741466409323,0.909243296012797,1.28892668450986,1.85613503951397,5.17524655308201,3.60024988196838,2.74716564146234,1.34699795506368,0,0.385239660814607,0.428883182749851,0.260994291965212,0.226705925512272,0.926089897295336,0,0.179088841081487,0.308801447160972,1.31570429747224,1.41351316756705,0.192914038270915,1.01365464391844,0.512483037175893,0.345430341731199,0,0.691292180758654,0.194860308839388,0.664324201566815,0.654261577023377,1.31043939538565,1.47463745252232,0.211312123358627,0,0.213383459388282,0.861074898304078,0,0.184105950251841,0.139879507719444,0,0,0.215649622793364,0.629063767423586,0.218419276384028,0.848662649770126,0.212574920101683,0.743614585554013,0,0.954013051960256,0.0788617450012534,0,2.1160556621441,4.593682160298,0.128458450192919,2.8339315265117,0.159633859057151,0,0.504143392443436,0.207471757392654,0.484426936895553,1.42769420259154,0.0981477185010256,0.353909170043221,0.550285795565037,0.231051332300676,1.90691047733584,0,0.397832444232549,0.526472298444801,1.41193548092464,0,0,1.31017534008077,0.147856086217045,0.135075169236789,0.781078098613847,0.620060389503552,0.126831620387814,0,1.09651553371436,2.48105589194647,0.879356221798103,0.383287282918786,0,0,2.42786241694653,0,0.0887023701626388,0.460935950223117,0.685952037749674,0.203909198930495,0.328863867814245,0.236387681767936,0.333694205676207,0.39246546425257,0.942693539496011,0,0,1.07963795609311,0,0.643288897589907,0,0,0,0,1.03608082081518,0.6828739083758,0,0,0,0.170426809518315,4.23387050190929,0,2.17144469965024,1.91107787795487,0.559277158988962,0.490751168076215,0,0.647428837187895,0.410651227424988,1.1598144313382,0.485710993059139,0.701818390386317,0.198950775161368,0,0.11294608203896,0.219881033490858,0,0.308696632431779,0.655678681511872,0.470317296361523,0.490296643507811,0,0.588925401344836,0.297046400327086,0.8453114551668,1.18948980281472,0.469919589899268,0.515663103788617,0,0,1.05868461514708,0.240724100067505,0.730336388246517,1.37618785021362,0.573358332605805,0.946629373159108,0.339957450954573,0.436350690340377,0,7.43990036333503,3.69740502905135,1.73050624849516,0.504665699340316,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0.50141507858475,1.28823786971007,1.87574891109325,0.829169439458779,0.413731983447581,1.27940389140589,1.1903221573187,0.129177819672012,0.186224142887574,0.33639558774184,0.318235791390825,0,0.870866991587845,0.684466602170562,0.26940821205835,0.430333232356058,0.665320713092027,0.0814032686109745,0.213454691755431,0,0.269475606319761,0,0.244482888365733,0.406896178315738,1.99727032255654,1.61019034872821,0.320568492303233 | |||
|short_description=p@chr22:43023683..43023702,- | |||
}} |
Latest revision as of 21:48, 28 July 2015
Short description: | p@chr22:43023683..43023702, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:43023683..43023702, - |
Coexpression cluster: | C2647_Adipocyte_Preadipocyte_tenocyte_Osteoblast_basal_Mesenchymal_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-16 | 76 |
multi fate stem cell | 1.18e-10 | 427 |
somatic stem cell | 6.28e-10 | 433 |
stem cell | 5.18e-09 | 441 |
smooth muscle cell | 3.83e-07 | 43 |
smooth muscle myoblast | 3.83e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.80e-09 | 78 |
trunk mesenchyme | 4.30e-08 | 122 |
vasculature | 5.44e-08 | 78 |
vascular system | 5.44e-08 | 78 |
mesoderm | 8.86e-08 | 315 |
mesoderm-derived structure | 8.86e-08 | 315 |
presumptive mesoderm | 8.86e-08 | 315 |
vessel | 1.76e-07 | 68 |
omentum | 2.25e-07 | 6 |
peritoneum | 2.25e-07 | 6 |
abdominal cavity | 2.25e-07 | 6 |
visceral peritoneum | 2.25e-07 | 6 |
mesenchyme | 3.02e-07 | 160 |
entire embryonic mesenchyme | 3.02e-07 | 160 |
dense mesenchyme tissue | 3.36e-07 | 73 |
somite | 4.77e-07 | 71 |
presomitic mesoderm | 4.77e-07 | 71 |
presumptive segmental plate | 4.77e-07 | 71 |
dermomyotome | 4.77e-07 | 71 |
trunk paraxial mesoderm | 4.77e-07 | 71 |
paraxial mesoderm | 8.33e-07 | 72 |
presumptive paraxial mesoderm | 8.33e-07 | 72 |