Personal tools

FFCP PHASE1:Hg19::chr2:109237734..109237743,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=3987
|EntrezGene=entrezgene:3987
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=6616
|HGNC=HGNC:6616
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=F8WE10
|UniProt=uniprot:F8WE10
|association_with_transcript=5bp_to_ENST00000422797_5end
|association_with_transcript=5bp_to_ENST00000422797_5end
|cluster_id=chr2:109237734..109237743,+
|coexpression_cluster_id=C854
|coexpression_cluster_id=C854
|description=CAGE_peak_20_at_LIMS1_5end
|description=CAGE_peak_20_at_LIMS1_5end

Revision as of 23:08, 28 July 2015

Short description:p20@LIMS1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_20_at_LIMS1_5end
Coexpression cluster:C854_argyrophil_CD4_anaplastic_smallcell_nonsmall_seminal_CD8
Association with transcript: 5bp_to_ENST00000422797_5end
EntrezGene:3987
HGNC: 6616
UniProt: F8WE10
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6
7




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data