FFCP PHASE1:Hg19::chr2:109237734..109237743,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3987 | |EntrezGene=entrezgene:3987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6616 | |HGNC=HGNC:6616 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F8WE10 | |UniProt=uniprot:F8WE10 | ||
|association_with_transcript=5bp_to_ENST00000422797_5end | |association_with_transcript=5bp_to_ENST00000422797_5end | ||
|cluster_id=chr2:109237734..109237743,+ | |||
|coexpression_cluster_id=C854 | |coexpression_cluster_id=C854 | ||
|description=CAGE_peak_20_at_LIMS1_5end | |description=CAGE_peak_20_at_LIMS1_5end |
Revision as of 23:08, 28 July 2015
Short description: | p20@LIMS1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_LIMS1_5end |
Coexpression cluster: | C854_argyrophil_CD4_anaplastic_smallcell_nonsmall_seminal_CD8 |
Association with transcript: | 5bp_to_ENST00000422797_5end |
EntrezGene: | 3987 |
HGNC: | 6616 |
UniProt: | F8WE10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p20@LIMS1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mature alpha-beta T cell | 3.69e-12 | 18 |
alpha-beta T cell | 3.69e-12 | 18 |
immature T cell | 3.69e-12 | 18 |
mature T cell | 3.69e-12 | 18 |
immature alpha-beta T cell | 3.69e-12 | 18 |
CD8-positive, alpha-beta T cell | 1.16e-10 | 11 |
T cell | 1.73e-08 | 25 |
pro-T cell | 1.73e-08 | 25 |
naive T cell | 1.98e-07 | 3 |
gingival epithelial cell | 7.09e-07 | 3 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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blood | 1.05e-07 | 15 |
haemolymphatic fluid | 1.05e-07 | 15 |
organism substance | 1.05e-07 | 15 |
gingival epithelium | 7.09e-07 | 3 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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clear cell adenocarcinoma | 3.66e-10 | 2 |
Showing 1 to 1 of 1 entries