FFCP PHASE1:Hg19::chr2:138173259..138173262,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:138173259..138173262,+ | |||
|coexpression_cluster_id=C4130 | |||
|description=CAGE_peak_at_chr2:138173259..138173262,+ | |description=CAGE_peak_at_chr2:138173259..138173262,+ | ||
|id=chr2:138173259..138173262,+ | |id=chr2:138173259..138173262,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.12e-07!2 | |ontology_enrichment_celltype=CL:0000242!1.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.22e-40;5!CL:0002321;2.75e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!2.91e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:169;7.07e-34;6!DOID:171;7.72e-21;10!DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.98e-34,6;DOID:171,6.99e-21,10;DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!4.07e-11!5;UBERON:0002410!4.07e-11!5;UBERON:0000073!2.92e-09!94;UBERON:0001016!2.92e-09!94;UBERON:0001049!9.53e-09!57;UBERON:0005068!9.53e-09!57;UBERON:0006241!9.53e-09!57;UBERON:0007135!9.53e-09!57;UBERON:0003075!1.42e-08!86;UBERON:0007284!1.42e-08!86;UBERON:0002346!5.21e-08!90;UBERON:0004121!1.12e-07!169;UBERON:0000924!2.31e-07!173;UBERON:0006601!2.31e-07!173;UBERON:0002616!4.36e-07!59 | |ontology_enrichment_uberon=UBERON:0000013!4.07e-11!5;UBERON:0002410!4.07e-11!5;UBERON:0000073!2.92e-09!94;UBERON:0001016!2.92e-09!94;UBERON:0001049!9.53e-09!57;UBERON:0005068!9.53e-09!57;UBERON:0006241!9.53e-09!57;UBERON:0007135!9.53e-09!57;UBERON:0003075!1.42e-08!86;UBERON:0007284!1.42e-08!86;UBERON:0002346!5.21e-08!90;UBERON:0004121!1.12e-07!169;UBERON:0000924!2.31e-07!173;UBERON:0006601!2.31e-07!173;UBERON:0002616!4.36e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.22e-40;5!UBERON:0002410;2.22e-40;5!UBERON:0000010;5.13e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.81e-40,5;UBERON:0002410,1.81e-40,5;UBERON:0000010,4.59e-23,8 | |||
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| ||
|short_description=p@chr2:138173259..138173262,+ | |short_description=p@chr2:138173259..138173262,+ | ||
}} | }} |
Latest revision as of 00:41, 29 July 2015
Short description: | p@chr2:138173259..138173262, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:138173259..138173262, + |
Coexpression cluster: | C4130_neuroblastoma_Burkitt_pons_occipital_optic_temporal_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.81e-40 | 5 |
autonomic nervous system | 1.81e-40 | 5 |
peripheral nervous system | 4.59e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.98e-34 | 6 |
neuroectodermal tumor | 6.99e-21 | 10 |
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |