FFCP PHASE1:Hg19::chr2:1417430..1417444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:1417430..1417444,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_at_chr2:1417430..1417444,+ | |description=CAGE_peak_at_chr2:1417430..1417444,+ | ||
|id=chr2:1417430..1417444,+ | |id=chr2:1417430..1417444,+ | ||
|ontology_enrichment_celltype=CL:0000080!8.97e-07!6 | |ontology_enrichment_celltype=CL:0000080!8.97e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.49e-79;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!7.73e-66!2;UBERON:0005418!3.61e-34!1;UBERON:0001389!3.61e-34!1;UBERON:0000026!3.61e-34!1;UBERON:0008784!3.61e-34!1;UBERON:0006058!3.61e-34!1;UBERON:0003663!3.61e-34!1;UBERON:0001383!3.61e-34!1;UBERON:0004256!3.61e-34!1;UBERON:0002529!3.61e-34!1;UBERON:0004708!3.61e-34!1;UBERON:0002101!3.61e-34!1;UBERON:0004709!3.61e-34!1;UBERON:0003661!3.61e-34!1;UBERON:0002471!3.61e-34!1;UBERON:0004357!3.61e-34!1;UBERON:0009872!3.61e-34!1;UBERON:0004347!3.61e-34!1;UBERON:0005420!3.61e-34!1;UBERON:0005732!3.61e-34!1;UBERON:0006057!3.61e-34!1;UBERON:0000978!3.61e-34!1;UBERON:0002103!3.61e-34!1;UBERON:0001665!3.61e-34!1;UBERON:0003823!3.61e-34!1;UBERON:0000154!3.61e-34!1;UBERON:0005733!3.61e-34!1;UBERON:0005730!3.61e-34!1;UBERON:0002046!1.59e-27!5;UBERON:0004117!1.59e-27!5;UBERON:0007689!1.59e-27!5;UBERON:0007123!1.59e-27!5;UBERON:0003091!1.59e-27!5;UBERON:0001630!7.67e-18!2;UBERON:0005090!7.67e-18!2;UBERON:0000974!3.97e-14!10;UBERON:0009722!4.00e-13!11;UBERON:0007690!4.00e-13!11;UBERON:0008814!6.78e-10!15 | |ontology_enrichment_uberon=UBERON:0000341!7.73e-66!2;UBERON:0005418!3.61e-34!1;UBERON:0001389!3.61e-34!1;UBERON:0000026!3.61e-34!1;UBERON:0008784!3.61e-34!1;UBERON:0006058!3.61e-34!1;UBERON:0003663!3.61e-34!1;UBERON:0001383!3.61e-34!1;UBERON:0004256!3.61e-34!1;UBERON:0002529!3.61e-34!1;UBERON:0004708!3.61e-34!1;UBERON:0002101!3.61e-34!1;UBERON:0004709!3.61e-34!1;UBERON:0003661!3.61e-34!1;UBERON:0002471!3.61e-34!1;UBERON:0004357!3.61e-34!1;UBERON:0009872!3.61e-34!1;UBERON:0004347!3.61e-34!1;UBERON:0005420!3.61e-34!1;UBERON:0005732!3.61e-34!1;UBERON:0006057!3.61e-34!1;UBERON:0000978!3.61e-34!1;UBERON:0002103!3.61e-34!1;UBERON:0001665!3.61e-34!1;UBERON:0003823!3.61e-34!1;UBERON:0000154!3.61e-34!1;UBERON:0005733!3.61e-34!1;UBERON:0005730!3.61e-34!1;UBERON:0002046!1.59e-27!5;UBERON:0004117!1.59e-27!5;UBERON:0007689!1.59e-27!5;UBERON:0007123!1.59e-27!5;UBERON:0003091!1.59e-27!5;UBERON:0001630!7.67e-18!2;UBERON:0005090!7.67e-18!2;UBERON:0000974!3.97e-14!10;UBERON:0009722!4.00e-13!11;UBERON:0007690!4.00e-13!11;UBERON:0008814!6.78e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.49e-79;5!UBERON:0002368;1.71e-11;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.49e-79,5;UBERON:0004117,3.49e-79,5;UBERON:0007689,3.49e-79,5;UBERON:0007123,3.49e-79,5;UBERON:0003091,3.49e-79,5;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0002530,5.66e-08,59 | |||
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|short_description=p@chr2:1417430..1417444,+ | |short_description=p@chr2:1417430..1417444,+ | ||
}} | }} |
Latest revision as of 00:44, 29 July 2015
Short description: | p@chr2:1417430..1417444, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:1417430..1417444, + |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr2:1417430..1417444+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.49e-79 | 5 |
pharyngeal pouch | 3.49e-79 | 5 |
thyroid diverticulum | 3.49e-79 | 5 |
pharyngeal pouch 2 | 3.49e-79 | 5 |
thyroid primordium | 3.49e-79 | 5 |
entire pharyngeal arch endoderm | 6.80e-37 | 11 |
early pharyngeal endoderm | 6.80e-37 | 11 |
pharyngeal arch system | 3.88e-23 | 18 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
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