FFCP PHASE1:Hg19::chr2:179494375..179494392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:179494375..179494392,- | |||
|coexpression_cluster_id=C618 | |coexpression_cluster_id=C618 | ||
|description=CAGE_peak_at_chr2:179494375..179494392,- | |description=CAGE_peak_at_chr2:179494375..179494392,- | ||
|id=chr2:179494375..179494392,- | |id=chr2:179494375..179494392,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.53e-21;1!UBERON:0010227;4.22e-21;1!UBERON:0005062;5.72e-21;4!UBERON:0007284;5.72e-21;4!UBERON:0010226;6.98e-21;1 | |||
|ontology_enrichment_disease=DOID:114!2.79e-23!2;DOID:178!1.75e-12!1;DOID:326!1.75e-12!1;DOID:3978!1.75e-12!1;DOID:3394!1.75e-12!1;DOID:5844!1.75e-12!1;DOID:1287!3.86e-12!4 | |ontology_enrichment_disease=DOID:114!2.79e-23!2;DOID:178!1.75e-12!1;DOID:326!1.75e-12!1;DOID:3978!1.75e-12!1;DOID:3394!1.75e-12!1;DOID:5844!1.75e-12!1;DOID:1287!3.86e-12!4 | ||
|ontology_enrichment_disease_v019=DOID:114;6.70e-40;2!DOID:178;6.98e-21;1!DOID:326;6.98e-21;1!DOID:3978;6.98e-21;1!DOID:3394;6.98e-21;1!DOID:5844;6.98e-21;1!DOID:1287;1.56e-20;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.49e-40,2;DOID:178,7.72e-21,1;DOID:326,7.72e-21,1;DOID:3978,7.72e-21,1;DOID:3394,7.72e-21,1;DOID:5844,7.72e-21,1;DOID:1287,1.41e-20,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!8.38e-26!27;UBERON:0003978!3.69e-16!3;UBERON:0009751!3.69e-16!3;UBERON:0000946!3.69e-16!3;UBERON:0002523!3.69e-16!3;UBERON:0005983!3.69e-16!3;UBERON:0002165!3.69e-16!3;UBERON:0002062!3.69e-16!3;UBERON:0007280!3.69e-16!3;UBERON:0004151!6.26e-16!3;UBERON:0002146!8.85e-13!1;UBERON:0005623!8.85e-13!1;UBERON:0002135!9.92e-13!1;UBERON:0002079!1.25e-12!1;UBERON:0002084!1.57e-12!1;UBERON:0002082!1.57e-12!1;UBERON:0004706!1.57e-12!1;UBERON:0007029!2.20e-12!1;UBERON:0003103!4.55e-12!69;UBERON:0000948!9.69e-12!24;UBERON:0005498!9.69e-12!24;UBERON:0004140!9.69e-12!24;UBERON:0009881!9.69e-12!24;UBERON:0004141!9.69e-12!24;UBERON:0003084!9.69e-12!24;UBERON:0007005!9.69e-12!24;UBERON:0004139!9.69e-12!24;UBERON:0004291!9.69e-12!24;UBERON:0007023!3.67e-10!115;UBERON:0002133!5.41e-07!2;UBERON:0002081!6.07e-07!2;UBERON:0001009!6.48e-07!113;UBERON:0000341!7.61e-07!2;UBERON:0000007!8.52e-07!2 | |ontology_enrichment_uberon=UBERON:0007100!8.38e-26!27;UBERON:0003978!3.69e-16!3;UBERON:0009751!3.69e-16!3;UBERON:0000946!3.69e-16!3;UBERON:0002523!3.69e-16!3;UBERON:0005983!3.69e-16!3;UBERON:0002165!3.69e-16!3;UBERON:0002062!3.69e-16!3;UBERON:0007280!3.69e-16!3;UBERON:0004151!6.26e-16!3;UBERON:0002146!8.85e-13!1;UBERON:0005623!8.85e-13!1;UBERON:0002135!9.92e-13!1;UBERON:0002079!1.25e-12!1;UBERON:0002084!1.57e-12!1;UBERON:0002082!1.57e-12!1;UBERON:0004706!1.57e-12!1;UBERON:0007029!2.20e-12!1;UBERON:0003103!4.55e-12!69;UBERON:0000948!9.69e-12!24;UBERON:0005498!9.69e-12!24;UBERON:0004140!9.69e-12!24;UBERON:0009881!9.69e-12!24;UBERON:0004141!9.69e-12!24;UBERON:0003084!9.69e-12!24;UBERON:0007005!9.69e-12!24;UBERON:0004139!9.69e-12!24;UBERON:0004291!9.69e-12!24;UBERON:0007023!3.67e-10!115;UBERON:0002133!5.41e-07!2;UBERON:0002081!6.07e-07!2;UBERON:0001009!6.48e-07!113;UBERON:0000341!7.61e-07!2;UBERON:0000007!8.52e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.32e-50;25!UBERON:0003978;1.39e-27;3!UBERON:0000946;1.39e-27;3!UBERON:0004151;3.80e-27;3!UBERON:0000948;9.79e-23;22!UBERON:0002146;2.30e-21;1!UBERON:0005623;2.30e-21;1!UBERON:0002135;2.82e-21;1!UBERON:0002079;4.22e-21;1!UBERON:0002084;6.98e-21;1!UBERON:0002082;6.98e-21;1!UBERON:0002133;2.47e-11;2!UBERON:0002081;3.02e-11;2!UBERON:0000341;3.89e-11;2!UBERON:0003103;4.49e-10;61!UBERON:0010313;5.57e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.04e-46,27;UBERON:0003978,1.39e-27,3;UBERON:0009751,1.39e-27,3;UBERON:0000946,1.39e-27,3;UBERON:0002523,1.39e-27,3;UBERON:0005983,1.39e-27,3;UBERON:0002165,1.39e-27,3;UBERON:0002062,1.39e-27,3;UBERON:0007280,1.39e-27,3;UBERON:0004151,3.56e-27,3;UBERON:0002146,2.30e-21,1;UBERON:0005623,2.30e-21,1;UBERON:0002135,2.82e-21,1;UBERON:0002079,4.22e-21,1;UBERON:0002084,6.31e-21,1;UBERON:0002082,6.31e-21,1;UBERON:0010226,6.31e-21,1;UBERON:0000948,7.16e-21,24;UBERON:0005498,7.16e-21,24;UBERON:0004140,7.16e-21,24;UBERON:0009881,7.16e-21,24;UBERON:0004141,7.16e-21,24;UBERON:0003084,7.16e-21,24;UBERON:0007005,7.16e-21,24;UBERON:0004139,7.16e-21,24;UBERON:0004291,7.16e-21,24;UBERON:0003103,2.50e-18,68;UBERON:0004797,2.00e-12,7;UBERON:0002133,2.47e-11,2;UBERON:0002081,3.02e-11,2;UBERON:0010227,3.02e-11,2;UBERON:0000341,4.52e-11,2;UBERON:0001009,5.34e-11,112;UBERON:0010313,5.57e-09,10;UBERON:0002342,5.57e-09,10;UBERON:0005062,5.57e-09,10;UBERON:0007023,2.87e-08,114 | |||
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|short_description=p@chr2:179494375..179494392,- | |short_description=p@chr2:179494375..179494392,- | ||
}} | }} |
Latest revision as of 03:25, 29 July 2015
Short description: | p@chr2:179494375..179494392, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:179494375..179494392, - |
Coexpression cluster: | C618_skeletal_heart_left_diaphragm_throat_skin_maxillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.04e-46 | 27 |
valve | 1.39e-27 | 3 |
cardiac mesenchyme | 1.39e-27 | 3 |
cardial valve | 1.39e-27 | 3 |
tunica intima | 1.39e-27 | 3 |
heart layer | 1.39e-27 | 3 |
endocardium | 1.39e-27 | 3 |
endocardial cushion | 1.39e-27 | 3 |
presumptive endocardium | 1.39e-27 | 3 |
cardiac chamber | 3.56e-27 | 3 |
pulmonary valve | 2.30e-21 | 1 |
semi-lunar valve | 2.30e-21 | 1 |
mitral valve | 2.82e-21 | 1 |
left cardiac atrium | 4.22e-21 | 1 |
heart left ventricle | 6.31e-21 | 1 |
cardiac ventricle | 6.31e-21 | 1 |
future cardiac ventricle | 6.31e-21 | 1 |
heart | 7.16e-21 | 24 |
primitive heart tube | 7.16e-21 | 24 |
primary heart field | 7.16e-21 | 24 |
anterior lateral plate mesoderm | 7.16e-21 | 24 |
heart tube | 7.16e-21 | 24 |
heart primordium | 7.16e-21 | 24 |
cardiac mesoderm | 7.16e-21 | 24 |
cardiogenic plate | 7.16e-21 | 24 |
heart rudiment | 7.16e-21 | 24 |
compound organ | 2.50e-18 | 68 |
blood vessel layer | 2.00e-12 | 7 |
atrioventricular valve | 2.47e-11 | 2 |
cardiac atrium | 3.02e-11 | 2 |
future cardiac atrium | 3.02e-11 | 2 |
throat | 4.52e-11 | 2 |
circulatory system | 5.34e-11 | 112 |
neural crest-derived structure | 5.57e-09 | 10 |
neural crest | 5.57e-09 | 10 |
neural fold | 5.57e-09 | 10 |
adult organism | 2.87e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.49e-40 | 2 |
vascular disease | 7.72e-21 | 1 |
ischemia | 7.72e-21 | 1 |
extrinsic cardiomyopathy | 7.72e-21 | 1 |
myocardial ischemia | 7.72e-21 | 1 |
myocardial infarction | 7.72e-21 | 1 |
cardiovascular system disease | 1.41e-20 | 4 |