FFCP PHASE1:Hg19::chr2:179494404..179494433,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:179494404..179494433,-
|short_description=p@chr2:179494404..179494433,-
|description=CAGE_peak_at_chr2:179494404..179494433,-
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:179494404..179494433,- | |||
|coexpression_cluster_id=C618 | |||
|description=CAGE_peak_at_chr2:179494404..179494433,- | |||
|id=chr2:179494404..179494433,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.16e-18;1!UBERON:0010227;5.72e-18;1!UBERON:0010226;8.72e-18;1!UBERON:0005062;9.51e-18;4!UBERON:0007284;9.51e-18;4 | |||
|ontology_enrichment_disease=DOID:114!1.00e-15!2;DOID:178!1.18e-08!1;DOID:326!1.18e-08!1;DOID:3978!1.18e-08!1;DOID:3394!1.18e-08!1;DOID:5844!1.18e-08!1;DOID:1287!2.65e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.51e-33;2!DOID:178;1.57e-17;1!DOID:326;1.57e-17;1!DOID:3978;1.57e-17;1!DOID:3394;1.57e-17;1!DOID:5844;1.57e-17;1!DOID:1287;2.49e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.39e-33,2;DOID:178,1.44e-17,1;DOID:326,1.44e-17,1;DOID:3978,1.44e-17,1;DOID:3394,1.44e-17,1;DOID:5844,1.44e-17,1;DOID:1287,2.39e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.37e-25!27;UBERON:0003978!7.02e-23!3;UBERON:0009751!7.02e-23!3;UBERON:0000946!7.02e-23!3;UBERON:0002523!7.02e-23!3;UBERON:0005983!7.02e-23!3;UBERON:0002165!7.02e-23!3;UBERON:0002062!7.02e-23!3;UBERON:0007280!7.02e-23!3;UBERON:0004151!1.09e-22!3;UBERON:0002133!1.00e-15!2;UBERON:0002081!1.08e-15!2;UBERON:0003103!2.30e-15!69;UBERON:0000948!2.96e-14!24;UBERON:0005498!2.96e-14!24;UBERON:0004140!2.96e-14!24;UBERON:0009881!2.96e-14!24;UBERON:0004141!2.96e-14!24;UBERON:0003084!2.96e-14!24;UBERON:0007005!2.96e-14!24;UBERON:0004139!2.96e-14!24;UBERON:0004291!2.96e-14!24;UBERON:0001723!2.74e-10!3;UBERON:0001033!2.74e-10!3;UBERON:0010056!2.74e-10!3;UBERON:0002146!6.50e-09!1;UBERON:0005623!6.50e-09!1;UBERON:0002135!7.01e-09!1;UBERON:0002079!7.56e-09!1;UBERON:0002084!9.46e-09!1;UBERON:0002082!9.46e-09!1;UBERON:0004706!9.46e-09!1;UBERON:0007029!1.10e-08!1;UBERON:0002134!1.48e-08!1;UBERON:0005208!1.48e-08!1;UBERON:0005946!1.48e-08!1;UBERON:0005965!1.48e-08!1;UBERON:0002078!1.48e-08!1;UBERON:0007023!3.75e-08!115;UBERON:0001882!3.79e-08!1;UBERON:0005403!3.79e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.84e-42;25!UBERON:0003978;2.63e-23;3!UBERON:0000946;2.63e-23;3!UBERON:0004151;5.45e-23;3!UBERON:0000948;5.07e-19;22!UBERON:0002146;3.75e-18;1!UBERON:0005623;3.75e-18;1!UBERON:0002135;4.44e-18;1!UBERON:0002079;5.72e-18;1!UBERON:0002084;8.72e-18;1!UBERON:0002082;8.72e-18;1!UBERON:0007029;1.22e-17;1!UBERON:0002133;1.03e-09;2!UBERON:0002081;1.17e-09;2!UBERON:0000341;1.57e-09;2!UBERON:0003103;1.89e-08;61!UBERON:0010313;1.16e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.25e-38,27;UBERON:0003978,2.63e-23,3;UBERON:0009751,2.63e-23,3;UBERON:0000946,2.63e-23,3;UBERON:0002523,2.63e-23,3;UBERON:0005983,2.63e-23,3;UBERON:0002165,2.63e-23,3;UBERON:0002062,2.63e-23,3;UBERON:0007280,2.63e-23,3;UBERON:0004151,5.15e-23,3;UBERON:0002146,3.75e-18,1;UBERON:0005623,3.75e-18,1;UBERON:0002135,4.44e-18,1;UBERON:0002079,5.26e-18,1;UBERON:0002084,8.72e-18,1;UBERON:0002082,8.72e-18,1;UBERON:0010226,8.72e-18,1;UBERON:0007029,1.22e-17,1;UBERON:0000948,1.87e-17,24;UBERON:0005498,1.87e-17,24;UBERON:0004140,1.87e-17,24;UBERON:0009881,1.87e-17,24;UBERON:0004141,1.87e-17,24;UBERON:0003084,1.87e-17,24;UBERON:0007005,1.87e-17,24;UBERON:0004139,1.87e-17,24;UBERON:0004291,1.87e-17,24;UBERON:0003103,4.47e-15,68;UBERON:0004797,1.46e-10,7;UBERON:0002133,1.03e-09,2;UBERON:0002081,1.12e-09,2;UBERON:0010227,1.12e-09,2;UBERON:0000341,1.57e-09,2;UBERON:0001009,6.34e-09,112;UBERON:0010313,1.16e-07,10;UBERON:0002342,1.16e-07,10;UBERON:0005062,1.16e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8469904585237,30.9366572415773,0.717873024576814,1.39775300349294,6.43839072204856,7.58782955302367,78.8733966994166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86164859010704,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,90.4655256443795,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0,4.99935306073855,0,0,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8469904585237,30.9366572415773,0.717873024576814,1.39775300349294,6.43839072204856,7.58782955302367,78.8733966994166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86164859010704,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,90.4655256443795,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0,4.99935306073855,0,0,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr2:179494404..179494433,- | |||
}} | }} |
Latest revision as of 03:25, 29 July 2015
Short description: | p@chr2:179494404..179494433, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:179494404..179494433, - |
Coexpression cluster: | C618_skeletal_heart_left_diaphragm_throat_skin_maxillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.25e-38 | 27 |
valve | 2.63e-23 | 3 |
cardiac mesenchyme | 2.63e-23 | 3 |
cardial valve | 2.63e-23 | 3 |
tunica intima | 2.63e-23 | 3 |
heart layer | 2.63e-23 | 3 |
endocardium | 2.63e-23 | 3 |
endocardial cushion | 2.63e-23 | 3 |
presumptive endocardium | 2.63e-23 | 3 |
cardiac chamber | 5.15e-23 | 3 |
pulmonary valve | 3.75e-18 | 1 |
semi-lunar valve | 3.75e-18 | 1 |
mitral valve | 4.44e-18 | 1 |
left cardiac atrium | 5.26e-18 | 1 |
heart left ventricle | 8.72e-18 | 1 |
cardiac ventricle | 8.72e-18 | 1 |
future cardiac ventricle | 8.72e-18 | 1 |
surface | 1.22e-17 | 1 |
heart | 1.87e-17 | 24 |
primitive heart tube | 1.87e-17 | 24 |
primary heart field | 1.87e-17 | 24 |
anterior lateral plate mesoderm | 1.87e-17 | 24 |
heart tube | 1.87e-17 | 24 |
heart primordium | 1.87e-17 | 24 |
cardiac mesoderm | 1.87e-17 | 24 |
cardiogenic plate | 1.87e-17 | 24 |
heart rudiment | 1.87e-17 | 24 |
compound organ | 4.47e-15 | 68 |
blood vessel layer | 1.46e-10 | 7 |
atrioventricular valve | 1.03e-09 | 2 |
cardiac atrium | 1.12e-09 | 2 |
future cardiac atrium | 1.12e-09 | 2 |
throat | 1.57e-09 | 2 |
circulatory system | 6.34e-09 | 112 |
neural crest-derived structure | 1.16e-07 | 10 |
neural crest | 1.16e-07 | 10 |
neural fold | 1.16e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.39e-33 | 2 |
vascular disease | 1.44e-17 | 1 |
ischemia | 1.44e-17 | 1 |
extrinsic cardiomyopathy | 1.44e-17 | 1 |
myocardial ischemia | 1.44e-17 | 1 |
myocardial infarction | 1.44e-17 | 1 |
cardiovascular system disease | 2.39e-17 | 4 |