FFCP PHASE1:Hg19::chr2:216269322..216269342,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216269322..216269342,+ | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_at_chr2:216269322..216269342,+ | |description=CAGE_peak_at_chr2:216269322..216269342,+ | ||
|id=chr2:216269322..216269342,+ | |id=chr2:216269322..216269342,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.83e-24!180;CL:0000057!3.64e-23!75;CL:0002371!3.17e-15!591;CL:0000144!3.39e-13!625;CL:0000048!5.38e-11!430;CL:0000723!5.97e-11!436;CL:0002620!7.46e-11!23;CL:0000034!2.74e-10!444;CL:0000680!2.86e-10!57;CL:0000056!2.86e-10!57;CL:0000355!2.86e-10!57;CL:0000187!3.90e-09!54;CL:0000548!5.67e-09!679;CL:0000004!5.67e-09!679;CL:0000255!5.67e-09!679;CL:0000183!8.88e-09!59;CL:0000012!1.16e-08!682;CL:0000393!6.75e-08!60;CL:0000211!6.75e-08!60 | |ontology_enrichment_celltype=CL:0000055!2.83e-24!180;CL:0000057!3.64e-23!75;CL:0002371!3.17e-15!591;CL:0000144!3.39e-13!625;CL:0000048!5.38e-11!430;CL:0000723!5.97e-11!436;CL:0002620!7.46e-11!23;CL:0000034!2.74e-10!444;CL:0000680!2.86e-10!57;CL:0000056!2.86e-10!57;CL:0000355!2.86e-10!57;CL:0000187!3.90e-09!54;CL:0000548!5.67e-09!679;CL:0000004!5.67e-09!679;CL:0000255!5.67e-09!679;CL:0000183!8.88e-09!59;CL:0000012!1.16e-08!682;CL:0000393!6.75e-08!60;CL:0000211!6.75e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000197;8.40e-10;6!CL:0000098;8.40e-10;6!CL:0002167;8.40e-10;6!CL:0002334;6.51e-08;12!CL:0000135;2.81e-07;3!CL:0000388;2.81e-07;3!CL:0002564;4.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.03e-16,76;CL:0000197,7.33e-10,6;CL:0000098,7.33e-10,6;CL:0002167,7.33e-10,6;CL:0002334,4.32e-08,12;CL:0000135,1.73e-07,3;CL:0000388,1.73e-07,3;CL:0000048,6.78e-07,427;CL:0002564,7.50e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.55e-07!14 | |ontology_enrichment_disease=DOID:2394!1.55e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.52e-12!83;UBERON:0002329!4.52e-12!83;UBERON:0003077!4.52e-12!83;UBERON:0003059!4.52e-12!83;UBERON:0007282!4.52e-12!83;UBERON:0009618!4.52e-12!83;UBERON:0007285!4.52e-12!83;UBERON:0005256!1.55e-11!143;UBERON:0004290!2.20e-10!70;UBERON:0002199!1.43e-09!45;UBERON:0002416!1.43e-09!45;UBERON:0000486!1.67e-09!82;UBERON:0003102!2.09e-09!95;UBERON:0001134!7.19e-09!61;UBERON:0002036!7.19e-09!61;UBERON:0003082!7.19e-09!61;UBERON:0002385!3.00e-08!63;UBERON:0001015!3.00e-08!63;UBERON:0000383!3.00e-08!63;UBERON:0002097!5.04e-08!40 | |ontology_enrichment_uberon=UBERON:0000914!4.52e-12!83;UBERON:0002329!4.52e-12!83;UBERON:0003077!4.52e-12!83;UBERON:0003059!4.52e-12!83;UBERON:0007282!4.52e-12!83;UBERON:0009618!4.52e-12!83;UBERON:0007285!4.52e-12!83;UBERON:0005256!1.55e-11!143;UBERON:0004290!2.20e-10!70;UBERON:0002199!1.43e-09!45;UBERON:0002416!1.43e-09!45;UBERON:0000486!1.67e-09!82;UBERON:0003102!2.09e-09!95;UBERON:0001134!7.19e-09!61;UBERON:0002036!7.19e-09!61;UBERON:0003082!7.19e-09!61;UBERON:0002385!3.00e-08!63;UBERON:0001015!3.00e-08!63;UBERON:0000383!3.00e-08!63;UBERON:0002097!5.04e-08!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.81e-07;3!UBERON:0000043;2.81e-07;3!UBERON:0007845;2.81e-07;3!UBERON:0002242;4.10e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.73e-07,3;UBERON:0000043,1.73e-07,3;UBERON:0007845,1.73e-07,3;UBERON:0002242,7.50e-07,3;UBERON:0003068,7.50e-07,3;UBERON:0002328,7.50e-07,3;UBERON:0004880,7.50e-07,3 | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.422863212287913,2.00146596706261,0,2.61701557230111,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.791300934685361,0.990130823680373,0.994192127183747,0.672325146451775,0.602694528023977,2.19093027116212,1.46379839637152,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,2.04580098949649,0.361439152384566,0,2.02785126545153,0,5.35298357332899,0.0945348171640679,0.443458794925128,0.527008714158756,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10047216776027,0,0,0,0,0,0,0,0,3.24056779152704,0,0,0,0,0,0.366403487860815,0,0,0.872188104285069,5.4666914686485,1.39293562831038,2.25095607382472,0.860509862246441,1.06400514659507,0,0,6.166688710429,0.311211035399766,0.942974704487816,0.326923806226917,0.302714855289863,3.45705554687999,0,1.87296046098192,0,2.98897361103602,0.23486899728753,0.161872944368132,0.280901613404497,0.204154171254893,1.59684612505298,0.413303124703062,1.18800285728205,0.741800787835671,0.910161361938026,0,0.505008341862199,0.375355559615893,0,0,3.0648779579902,0.45071417671979,1.81491493056034,0.89694817844431,1.06778694409284,0.635795703478686,2.10063767259082,0.309157587715317,2.06112432036503,0.18611685633159,1.5189869901714,0.487185025805993,1.26216887122057,0.552299391853796,0.80823028409406,1.06502877754984,0.503760491138201,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0,0,0,4.5026865673502,0,6.50115099244771,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.686271241194102,0.548751427043128,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.939269553886573,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.839910640994298,0,3.67189943081678,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.600686115687835,0,0.112131084345361,0,0.51336800074665,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0.289562613335158,2.26023954805422,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.10422342547226,3.50119364741774,1.08506009479894,14.5579603071565,13.5606031485843,8.98903765693428,1.87426263988341,0,0,0,1.99267679560631,0.184369168541703,0.868836144680828,0,0.343143423810856,0,0,0,0,1.66435439510497,2.11673205330776,0.248107807818777,1.68808170616869,3.92924132206303,0.256278298511402,0,2.73451665944133,0,2.92998418225046,1.9531789784444,0.98552587216571,1.03850885836724,1.39452454151951,0.604297247958111,1.80455823272956,0,0.34444334449382,0.364182336013434,1.57349297951309,0,0.770153371044148,0,1.46139224653261,0.211103257785751,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0.676695028044854,1.54048617114644,2.30255512089194,0.275673144969061,2.25582514223375,3.0453505721988,0.681813019328807,0.890320356467374,0.991709492165869,0.768760269460425,0,0.4046311234222,0,2.20368642781448,0,0,0,0,0,0,0,0.632758849437452,0.571890581771475,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,1.09814811894422,0.471249609382746,0,1.58510321173008,0,0.48763373908959,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,2.65375590096488,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,1.57752487424457,1.3754865741837,0.35667105148125,0,1.89996871767898,2.63435914367922,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0,2.56010021552684,0,0,0.597743964753209,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,3.82801391678303,0.274792780205587,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,2.88239906833923,0,1.26053091691558,0.741742725430498,1.07845670166696,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,1.63293680054705,0,0,2.04465626142506,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,2.38807684618998,2.57084640831947,0,2.46223906857616,3.0188148210309,2.66943366478961,0.686520205190771,3.17584939902802,0.932623203496683,0.443565449968902,0.318593534327405,1.34940933649081,0.621051827505038,0.414706207840855,1.32920857278997,0.521745061811734,0.450772826991655,0.380805212168795,0.406870733204662,0.545545977607678,1.50374779859484,0.928067519756987,1.99047944349308,0.80005552932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| ||
|short_description=p@chr2:216269322..216269342,+ | |short_description=p@chr2:216269322..216269342,+ | ||
}} | }} |
Latest revision as of 06:09, 29 July 2015
Short description: | p@chr2:216269322..216269342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216269322..216269342, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.03e-16 | 76 |
receptor cell | 7.33e-10 | 6 |
sensory epithelial cell | 7.33e-10 | 6 |
olfactory epithelial cell | 7.33e-10 | 6 |
preadipocyte | 4.32e-08 | 12 |
fibrocyte | 1.73e-07 | 3 |
tendon cell | 1.73e-07 | 3 |
multi fate stem cell | 6.78e-07 | 427 |
nucleus pulposus cell of intervertebral disc | 7.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.73e-07 | 3 |
tendon | 1.73e-07 | 3 |
regular connective tissue | 1.73e-07 | 3 |
nucleus pulposus | 7.50e-07 | 3 |
axial mesoderm | 7.50e-07 | 3 |
notochord | 7.50e-07 | 3 |
chordamesoderm | 7.50e-07 | 3 |