FFCP PHASE1:Hg19::chr2:217541580..217541591,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:217541580..217541591,- | |||
|coexpression_cluster_id=C252 | |coexpression_cluster_id=C252 | ||
|description=CAGE_peak_at_chr2:217541580..217541591,- | |description=CAGE_peak_at_chr2:217541580..217541591,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.44e-24;6!CL:0000098;1.44e-24;6!CL:0002167;1.44e-24;6!CL:0000214;1.93e-13;3!CL:0002616;2.74e-10;1!CL:0000499;4.54e-08;28!CL:0000710;1.63e-07;20 | |ontology_enrichment_celltype_v019=CL:0000197;1.44e-24;6!CL:0000098;1.44e-24;6!CL:0002167;1.44e-24;6!CL:0000214;1.93e-13;3!CL:0002616;2.74e-10;1!CL:0000499;4.54e-08;28!CL:0000710;1.63e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.44e-24,6;CL:0000098,1.44e-24,6;CL:0002167,1.44e-24,6;CL:0000214,1.93e-13,3;CL:0002616,1.89e-10,1;CL:0000499,4.65e-08,28;CL:0000710,1.63e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.74e-10;1 | |ontology_enrichment_development_v019=UBERON:0010115;2.74e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.79e-13;3!DOID:127;2.79e-13;3!DOID:3571;2.74e-10;1!DOID:0060072;3.45e-10;4 | |ontology_enrichment_disease_v019=DOID:0060084;2.79e-13;3!DOID:127;2.79e-13;3!DOID:3571;2.74e-10;1!DOID:0060072;3.45e-10;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.57e-13,3;DOID:127,3.57e-13,3;DOID:3571,2.50e-10,1;DOID:0060072,4.15e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-10!115;UBERON:0005156!4.40e-07!59;UBERON:0000990!4.40e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!1.17e-10!115;UBERON:0005156!4.40e-07!59;UBERON:0000990!4.40e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.93e-13;3!UBERON:0007616;1.93e-13;3!UBERON:0002217;1.93e-13;3!UBERON:0002018;1.93e-13;3!UBERON:0002363;2.74e-10;1!UBERON:0001301;2.74e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0006915;1.93e-13;3!UBERON:0007616;1.93e-13;3!UBERON:0002217;1.93e-13;3!UBERON:0002018;1.93e-13;3!UBERON:0002363;2.74e-10;1!UBERON:0001301;2.74e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.93e-13,3;UBERON:0007616,1.93e-13,3;UBERON:0002217,1.93e-13,3;UBERON:0002018,1.93e-13,3;UBERON:0001301,1.73e-10,1;UBERON:0002363,4.75e-10,1;UBERON:0007645,4.75e-10,1;UBERON:0007647,4.75e-10,1;UBERON:0010115,4.75e-10,1 | |||
|phase1_expression=0,0.642301571672949,0.563817616383885,0,0.446961094427288,1.74467704820074,0,0,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0.427114777637135,0.635795703478686,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0.323292113637624,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,2.70362119990049,2.49800584316026,1.26161932027148,1.28855556491985,0.300946099727719,0,0,0,0,0,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.804269605718038,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,1.37777337797528,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,1.59101623962968,0.78494864019923,0,0,0,0,0,0,0,0,0,0.272999822815972,2.68670320712054,0,0,0.66343897524122,2.63070531152258,0.578775534266688,0,0,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,2.32218398827431,2.63435914367922,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0,0,0.211125408127993,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0.394584402849391,0,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0.261177619741208,1.7472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509991088181609,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.367182116944987,0,0,0,0,0,0,1.08599920350743,0,3.5924609612035,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0.545545977607678,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,2.1437183414724,0.128458450192919,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0,1.65462722368366,0,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0.431855182437243,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,0,0,0,2.16313281061895,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0,1.0661699095049,0,0,0,0,0.445530107947154,0.404234377916439,0.435433495793923,0,0.0673520530145875,0,0.665320713092027,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0.402547587182052,0 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| ||
|short_description=p@chr2:217541580..217541591,- | |short_description=p@chr2:217541580..217541591,- | ||
}} | }} |
Latest revision as of 06:27, 29 July 2015
Short description: | p@chr2:217541580..217541591, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217541580..217541591, - |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.44e-24 | 6 |
sensory epithelial cell | 1.44e-24 | 6 |
olfactory epithelial cell | 1.44e-24 | 6 |
synovial cell | 1.93e-13 | 3 |
perirenal adipocyte cell | 1.89e-10 | 1 |
stromal cell | 4.65e-08 | 28 |
neurecto-epithelial cell | 1.63e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.93e-13 | 3 |
layer of synovial tissue | 1.93e-13 | 3 |
synovial joint | 1.93e-13 | 3 |
synovial membrane of synovial joint | 1.93e-13 | 3 |
epididymis | 1.73e-10 | 1 |
dura mater | 4.75e-10 | 1 |
future meninx | 4.75e-10 | 1 |
ectomeninx | 4.75e-10 | 1 |
future dura mater | 4.75e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.57e-13 | 3 |
leiomyoma | 3.57e-13 | 3 |
liver cancer | 2.50e-10 | 1 |
benign neoplasm | 4.15e-10 | 4 |