FFCP PHASE1:Hg19::chr2:218793134..218793139,-: Difference between revisions
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|id=chr2:218793134..218793139,-
|short_description=p@chr2:218793134..218793139,-
|description=CAGE_peak_at_chr2:218793134..218793139,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:218793134..218793139,- | |||
|description=CAGE_peak_at_chr2:218793134..218793139,- | |||
|id=chr2:218793134..218793139,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.16e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,6.31e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.88e-21;1!UBERON:0010226;5.16e-21;1!UBERON:0007297;2.02e-11;2!UBERON:0010122;3.34e-11;2!UBERON:0006965;3.34e-11;2!UBERON:0009847;4.84e-08;3!UBERON:0003353;4.84e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.43e-39!115;UBERON:0000369!2.56e-12!4;UBERON:0002435!2.56e-12!4;UBERON:0000204!2.56e-12!4;UBERON:0010082!2.56e-12!4;UBERON:0002308!1.14e-11!9;UBERON:0000125!1.14e-11!9;UBERON:0004151!3.67e-11!3;UBERON:0001049!1.65e-10!57;UBERON:0005068!1.65e-10!57;UBERON:0006241!1.65e-10!57;UBERON:0007135!1.65e-10!57;UBERON:0005383!5.92e-10!3;UBERON:0005382!5.92e-10!3;UBERON:0000988!1.27e-09!3;UBERON:0002298!2.95e-09!8;UBERON:0002616!9.86e-09!59;UBERON:0002081!5.85e-08!2;UBERON:0002020!6.14e-08!34;UBERON:0003528!6.14e-08!34;UBERON:0003075!1.21e-07!86;UBERON:0007284!1.21e-07!86;UBERON:0001873!2.44e-07!2;UBERON:0010122!2.44e-07!2;UBERON:0002148!3.23e-07!2;UBERON:0009662!3.23e-07!2;UBERON:0002346!3.99e-07!90;UBERON:0009663!4.68e-07!7;UBERON:0000955!7.51e-07!69;UBERON:0006238!7.51e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.82e-27;3!UBERON:0000998;1.88e-21;1!UBERON:0002134;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0005208;1.88e-21;1!UBERON:0004145;1.88e-21;1!UBERON:0005946;1.88e-21;1!UBERON:0005965;1.88e-21;1!UBERON:0002078;1.88e-21;1!UBERON:0002084;5.16e-21;1!UBERON:0002082;5.16e-21;1!UBERON:0002081;2.02e-11;2!UBERON:0002133;2.02e-11;2!UBERON:0001873;3.34e-11;2!UBERON:0005406;3.34e-11;2!UBERON:0003978;4.84e-08;3!UBERON:0000946;4.84e-08;3!UBERON:0006947;4.84e-08;3!UBERON:0004054;4.84e-08;3!UBERON:0005383;6.78e-08;3!UBERON:0005382;6.78e-08;3!UBERON:0003937;1.13e-07;12!UBERON:0005399;1.13e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.06e-27,3;UBERON:0002134,1.53e-21,1;UBERON:0005208,1.53e-21,1;UBERON:0005946,1.53e-21,1;UBERON:0005965,1.53e-21,1;UBERON:0002078,1.53e-21,1;UBERON:0000998,1.88e-21,1;UBERON:0006868,1.88e-21,1;UBERON:0002084,2.82e-21,1;UBERON:0002082,2.82e-21,1;UBERON:0010226,2.82e-21,1;UBERON:0002081,1.82e-11,2;UBERON:0002133,1.82e-11,2;UBERON:0010227,1.82e-11,2;UBERON:0001873,2.73e-11,2;UBERON:0010122,2.73e-11,2;UBERON:0005406,3.70e-11,2;UBERON:0007023,2.49e-08,114;UBERON:0003978,4.52e-08,3;UBERON:0009751,4.52e-08,3;UBERON:0000946,4.52e-08,3;UBERON:0002523,4.52e-08,3;UBERON:0005983,4.52e-08,3;UBERON:0004145,4.52e-08,3;UBERON:0002165,4.52e-08,3;UBERON:0002062,4.52e-08,3;UBERON:0007280,4.52e-08,3;UBERON:0006947,4.84e-08,3;UBERON:0004054,4.84e-08,3;UBERON:0005383,5.93e-08,3;UBERON:0005382,5.93e-08,3;UBERON:0003937,1.16e-07,12;UBERON:0005399,1.16e-07,12 | |||
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| ||
|short_description=p@chr2:218793134..218793139,- | |||
}} | }} |
Latest revision as of 06:32, 29 July 2015
Short description: | p@chr2:218793134..218793139, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:218793134..218793139, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 6.31e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.06e-27 | 3 |
tricuspid valve | 1.53e-21 | 1 |
right atrium valve | 1.53e-21 | 1 |
outflow tract of atrium | 1.53e-21 | 1 |
outflow part of right atrium | 1.53e-21 | 1 |
right cardiac atrium | 1.53e-21 | 1 |
seminal vesicle | 1.88e-21 | 1 |
seminal fluid secreting gland | 1.88e-21 | 1 |
heart left ventricle | 2.82e-21 | 1 |
cardiac ventricle | 2.82e-21 | 1 |
future cardiac ventricle | 2.82e-21 | 1 |
cardiac atrium | 1.82e-11 | 2 |
atrioventricular valve | 1.82e-11 | 2 |
future cardiac atrium | 1.82e-11 | 2 |
caudate nucleus | 2.73e-11 | 2 |
future caudate nucleus | 2.73e-11 | 2 |
perirenal fat | 3.70e-11 | 2 |
adult organism | 2.49e-08 | 114 |
valve | 4.52e-08 | 3 |
cardiac mesenchyme | 4.52e-08 | 3 |
cardial valve | 4.52e-08 | 3 |
tunica intima | 4.52e-08 | 3 |
heart layer | 4.52e-08 | 3 |
outflow tract | 4.52e-08 | 3 |
endocardium | 4.52e-08 | 3 |
endocardial cushion | 4.52e-08 | 3 |
presumptive endocardium | 4.52e-08 | 3 |
male genital duct | 4.84e-08 | 3 |
internal male genitalia | 4.84e-08 | 3 |
caudate-putamen | 5.93e-08 | 3 |
dorsal striatum | 5.93e-08 | 3 |
sex gland | 1.16e-07 | 12 |
male reproductive gland | 1.16e-07 | 12 |