FFCP PHASE1:Hg19::chr2:27884081..27884103,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:27884081..27884103,+
|short_description=p@chr2:27884081..27884103,+
|description=CAGE_peak_at_chr2:27884081..27884103,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:27884081..27884103,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_at_chr2:27884081..27884103,+ | |||
|id=chr2:27884081..27884103,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0000575;2.48e-10;2!CL:0002600;2.48e-10;2!CL:0002564;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.30e-19,1;CL:0002625,1.30e-19,1;CL:0000216,1.30e-19,1;CL:0002600,2.27e-10,2;CL:0000575,2.99e-10,2;CL:0002564,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.71e-19;1!UBERON:0003056;2.63e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!2.12e-08!239;DOID:0050687!2.31e-08!143;DOID:162!4.13e-08!235;DOID:305!4.21e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.72e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0000941;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0001785;2.71e-19;1!UBERON:0002464;2.71e-19;1!UBERON:0004904;2.71e-19;1!UBERON:0001021;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0003714;2.48e-10;2!UBERON:0005162;2.48e-10;2!UBERON:0000122;2.48e-10;2!UBERON:0004909;2.48e-10;2!UBERON:0000010;4.61e-09;8!UBERON:0002242;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.30e-19,1;UBERON:0001343,1.30e-19,1;UBERON:0004910,1.30e-19,1;UBERON:0005154,1.30e-19,1;UBERON:0005295,1.30e-19,1;UBERON:0004813,1.30e-19,1;UBERON:0005297,1.30e-19,1;UBERON:0005294,1.30e-19,1;UBERON:0010141,1.30e-19,1;UBERON:0005891,1.30e-19,1;UBERON:0000941,1.56e-19,1;UBERON:0001785,1.56e-19,1;UBERON:0002464,1.56e-19,1;UBERON:0004904,1.56e-19,1;UBERON:0001021,1.56e-19,1;UBERON:0003902,1.56e-19,1;UBERON:0005425,1.56e-19,1;UBERON:0004909,1.72e-10,2;UBERON:0003714,1.89e-10,2;UBERON:0005162,1.89e-10,2;UBERON:0000122,1.89e-10,2;UBERON:0000010,4.09e-09,8;UBERON:0002242,3.35e-07,3;UBERON:0003068,3.35e-07,3;UBERON:0002328,3.35e-07,3;UBERON:0004880,3.35e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.618831764800233,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.376627918784408,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.853015394924529,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0,0,0,0,0.575384784644301,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.130979075497713,1.09288586487763,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0.805658634218294,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0,0.490385709340376,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.117434498643765,0.485618833104395,0.280901613404497,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.661763836394364,0,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0.658501712451753,0,0.402115889646523,0.462942225792648,0,0,0,0.463721619900307,0.234817388471643,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0.335964256397719,0.141775097242386,0.447792613514241,0.581267877027924,0.383382679165211,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.308482478109971,0.600686115687835,1.14330573052231,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.602878754119172,0,0.199945982364114,0,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,0,0,0.336255431980582,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0,1.00034104211935,0.271265023699736,0,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.604780586659361,0,0.61384789315225,0,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.246381468041427,0.519254429183621,0.116210378459959,0.604297247958111,0,0,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0.522870902049801,0.256450125116389,0.984043937099117,0.325378394664303,0,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,0.870036464629098,0.308097234229289,0.15350367472613,0,0,0,0.170453254832202,0.356128142586949,0.330569830721956,0.384380134730212,0.127612712494584,0.2023155617111,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.682499557039929,0.424216295861138,0,0,0,0,1.15755106853338,0,0,0,0,0,0.294747123039363,0,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.427296284509893,0,0.980160863924127,0.557409525377156,0.577076851905779,0.497992903438899,0.159426272728822,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.50787533340481,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.146508179271894,0.242721043499027,0,0.568272293612826,0,0,0,0.994147647766298,0,0.667852230137435,0.659215496907038,0,0,0.276283915531148,0,0.511343412510774,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0.834912883456661,0,0,0.262379999988587,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0.871507708151921,0,0,0,0.46112780877612,0.269272933229316,0.434589487688032,0,0.183195186803725,0.533034776018635,0,0.31396051279005,0.332423363800313,0,0,0,0,0.476809736941136,0,0.163232808159148,0.706765357169704,0,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0.337005664903385,0.802577647298789,0.234264445725339,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0.60129367765797,0.10368819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| ||
|short_description=p@chr2:27884081..27884103,+ | |||
}} | }} |
Latest revision as of 09:15, 29 July 2015
Short description: | p@chr2:27884081..27884103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:27884081..27884103, + |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.30e-19 | 1 |
seminiferous tubule epithelial cell | 1.30e-19 | 1 |
Sertoli cell | 1.30e-19 | 1 |
smooth muscle cell of trachea | 2.27e-10 | 2 |
corneal epithelial cell | 2.99e-10 | 2 |
nucleus pulposus cell of intervertebral disc | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.30e-19 | 1 |
seminiferous tubule of testis | 1.30e-19 | 1 |
epithelium of male gonad | 1.30e-19 | 1 |
epithelial cord | 1.30e-19 | 1 |
sex cord | 1.30e-19 | 1 |
seminiferous tubule epithelium | 1.30e-19 | 1 |
testis sex cord | 1.30e-19 | 1 |
genital ridge | 1.30e-19 | 1 |
primitive sex cord of indifferent gonad | 1.30e-19 | 1 |
coelomic epithelium | 1.30e-19 | 1 |
cranial nerve II | 1.56e-19 | 1 |
cranial nerve | 1.56e-19 | 1 |
nerve trunk | 1.56e-19 | 1 |
nerve connecting eye with brain | 1.56e-19 | 1 |
nerve | 1.56e-19 | 1 |
retinal neural layer | 1.56e-19 | 1 |
presumptive neural retina | 1.56e-19 | 1 |
epithelium of gonad | 1.72e-10 | 2 |
neural tissue | 1.89e-10 | 2 |
multi cell component structure | 1.89e-10 | 2 |
neuron projection bundle | 1.89e-10 | 2 |
peripheral nervous system | 4.09e-09 | 8 |
nucleus pulposus | 3.35e-07 | 3 |
axial mesoderm | 3.35e-07 | 3 |
notochord | 3.35e-07 | 3 |
chordamesoderm | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.72e-10 | 2 |