FFCP PHASE1:Hg19::chr2:31607762..31607771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:31607762..31607771,- | |||
|description=CAGE_peak_at_chr2:31607762..31607771,- | |description=CAGE_peak_at_chr2:31607762..31607771,- | ||
|id=chr2:31607762..31607771,- | |id=chr2:31607762..31607771,- | ||
|ontology_enrichment_celltype=CL:0000066!2.75e-16!254;CL:0002076!4.85e-15!43;CL:0000223!8.86e-11!59;CL:0002251!2.08e-08!21;CL:0000063!4.30e-07!578 | |ontology_enrichment_celltype=CL:0000066!2.75e-16!254;CL:0002076!4.85e-15!43;CL:0000223!8.86e-11!59;CL:0002251!2.08e-08!21;CL:0000063!4.30e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:1001319;8.62e-12;1!CL:1000600;8.62e-12;1!CL:0000313;8.62e-12;1!CL:0002327;2.13e-11;4!CL:0002535;8.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.62e-12,1;CL:1000600,5.62e-12,1;CL:0000313,8.64e-12,1;CL:0002327,1.73e-11,4;CL:0000076,9.02e-10,63;CL:0000066,2.56e-08,253;CL:0002535,8.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.47e-14!14;DOID:305!1.38e-11!106;DOID:0050687!2.21e-08!143;DOID:193!3.73e-08!29;DOID:120!5.09e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.67e-36;14!DOID:2152;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.32e-36,14;DOID:2152,8.64e-12,1;DOID:305,1.86e-10,106;DOID:0050687,2.49e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.83e-08!95;UBERON:0003729!8.85e-08!5;UBERON:0000161!4.00e-07!35;UBERON:0004119!4.91e-07!169;UBERON:0000925!4.91e-07!169;UBERON:0006595!4.91e-07!169;UBERON:0000166!8.87e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;8.62e-12;1!UBERON:0004911;8.62e-12;1!UBERON:0001256;8.62e-12;1!UBERON:0001259;8.62e-12;1!UBERON:0001911;2.13e-11;4!UBERON:0003343;2.13e-11;4!UBERON:0004785;2.13e-11;4!UBERON:0000974;6.83e-08;6!UBERON:0006955;8.93e-07;2!UBERON:0004801;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.62e-12,1;UBERON:0001256,5.62e-12,1;UBERON:0001259,5.62e-12,1;UBERON:0004911,8.64e-12,1;UBERON:0003343,1.64e-11,4;UBERON:0004785,1.64e-11,4;UBERON:0001911,1.73e-11,4;UBERON:0005333,1.73e-11,4;UBERON:0008425,1.73e-11,4;UBERON:0005311,1.73e-11,4;UBERON:0006955,8.93e-07,2;UBERON:0004801,8.93e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.635795703478686,0.600182192168805,0,0.257640540045629,0.18611685633159,0.506328996723799,0,0.252433774244115,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.201057944823262,0.833296006426766,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0.850650583454319,1.52249488594842,1.45316969256981,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,0,0,0,0.553107505625109,0.521301686808497,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.40101294060657,0.460404944679482,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,2.67986696238627,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,1.27281299170375,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0,0,2.65861549082874,0.330991955875499,0.313932918407225,0,1.70765727617876,0.277349346026277,0.347119476670262,0.195984794828755,4.87531556850254,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0,0,0,0,0.397429223405979,0,0.195551382734803,0.480952921509202,0,0,0,0,0,0.576219191952599,0,0.707082103850386,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86480665151949,0.235939446695481,0.366857197043358,1.27078232765372,0,0,0,0,0.80682027481408,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.590969204419841,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0.591660003652827,0.340853619036631,0,0,0.31020638566432,0,1.34226518157351,0.098150233615243,0.121917924982269,0,0.615976841137482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78553938605658,1.05868461514708,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0,0,0,0,0,0,0,1.62806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.635795703478686,0.600182192168805,0,0.257640540045629,0.18611685633159,0.506328996723799,0,0.252433774244115,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.201057944823262,0.833296006426766,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0.850650583454319,1.52249488594842,1.45316969256981,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,0,0,0,0.553107505625109,0.521301686808497,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.40101294060657,0.460404944679482,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,2.67986696238627,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,1.27281299170375,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0,0,2.65861549082874,0.330991955875499,0.313932918407225,0,1.70765727617876,0.277349346026277,0.347119476670262,0.195984794828755,4.87531556850254,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0,0,0,0,0.397429223405979,0,0.195551382734803,0.480952921509202,0,0,0,0,0,0.576219191952599,0,0.707082103850386,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86480665151949,0.235939446695481,0.366857197043358,1.27078232765372,0,0,0,0,0.80682027481408,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.590969204419841,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0.591660003652827,0.340853619036631,0,0,0.31020638566432,0,1.34226518157351,0.098150233615243,0.121917924982269,0,0.615976841137482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78553938605658,1.05868461514708,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0,0,0,0,0,0,0,1.62806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:31607762..31607771,- | |short_description=p@chr2:31607762..31607771,- | ||
}} | }} |
Latest revision as of 09:36, 29 July 2015
Short description: | p@chr2:31607762..31607771, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:31607762..31607771, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.62e-12 | 1 |
lower urinary tract cell | 5.62e-12 | 1 |
serous secreting cell | 8.64e-12 | 1 |
mammary gland epithelial cell | 1.73e-11 | 4 |
squamous epithelial cell | 9.02e-10 | 63 |
epithelial cell | 2.56e-08 | 253 |
epithelial cell of cervix | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 5.62e-12 | 1 |
wall of urinary bladder | 5.62e-12 | 1 |
mucosa of urinary bladder | 5.62e-12 | 1 |
epithelium of female gonad | 8.64e-12 | 1 |
mucosa of oral region | 1.64e-11 | 4 |
respiratory system mucosa | 1.64e-11 | 4 |
mammary gland | 1.73e-11 | 4 |
mammary bud | 1.73e-11 | 4 |
mammary ridge | 1.73e-11 | 4 |
mammary placode | 1.73e-11 | 4 |
uterine epithelium | 8.93e-07 | 2 |
cervix epithelium | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.32e-36 | 14 |
ovary epithelial cancer | 8.64e-12 | 1 |
carcinoma | 1.86e-10 | 106 |
cell type cancer | 2.49e-07 | 143 |