FFCP PHASE1:Hg19::chr2:51259641..51259642,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9378 | |EntrezGene=entrezgene:9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8008 | |HGNC=HGNC:8008 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=E7EQN4,Q9ULB1,A7E294,A4FVB9,Q49A31 | |UniProt=uniprot:E7EQN4,uniprot:Q9ULB1,uniprot:A7E294,uniprot:A4FVB9,uniprot:Q49A31 | ||
|association_with_transcript=31bp_to_ENST00000405581,ENST00000406316,NM_001135659,NM_004801,uc002rxd.1,uc002rxe.3,uc010fbq.2_5end | |association_with_transcript=31bp_to_ENST00000405581,ENST00000406316,NM_001135659,NM_004801,uc002rxd.1,uc002rxe.3,uc010fbq.2_5end | ||
|cluster_id=chr2:51259641..51259642,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_21_at_NRXN1_5end | |description=CAGE_peak_21_at_NRXN1_5end | ||
Revision as of 10:44, 29 July 2015
| Short description: | p21@NRXN1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_21_at_NRXN1_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | 31bp_to_ENST00000405581, ENST00000406316, NM_001135659, NM_004801, uc002rxd.1, uc002rxe.3, uc010fbq.2_5end |
| EntrezGene: | 9378 |
| HGNC: | 8008 |
| UniProt: | E7EQN4Q9ULB1A7E294A4FVB9Q49A31 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p21@NRXN1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 2.46e-79 | 22 |
| cerebral cortex | 7.42e-70 | 25 |
| pallium | 7.42e-70 | 25 |
| cerebral hemisphere | 5.40e-69 | 32 |
| neocortex | 1.28e-66 | 20 |
| telencephalon | 7.19e-65 | 34 |
| regional part of nervous system | 1.66e-62 | 53 |
| regional part of brain | 1.66e-62 | 53 |
| regional part of telencephalon | 1.93e-61 | 32 |
| regional part of forebrain | 5.82e-60 | 41 |
Showing 1 to 10 of 66 entries
