FFCP PHASE1:Hg19::chr2:69741832..69741847,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:69741832..69741847,- | |||
|coexpression_cluster_id=C1678 | |coexpression_cluster_id=C1678 | ||
|description=CAGE_peak_at_chr2:69741832..69741847,- | |description=CAGE_peak_at_chr2:69741832..69741847,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.12e-38;3!UBERON:0003057;1.12e-38;3!UBERON:0006601;8.88e-08;82 | |ontology_enrichment_development_v019=UBERON:0006241;1.12e-38;3!UBERON:0003057;1.12e-38;3!UBERON:0006601;8.88e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.53e-38!115;UBERON:0001049!3.14e-37!57;UBERON:0005068!3.14e-37!57;UBERON:0006241!3.14e-37!57;UBERON:0007135!3.14e-37!57;UBERON:0001017!2.27e-32!82;UBERON:0005743!1.95e-30!86;UBERON:0002616!2.70e-30!59;UBERON:0000073!2.29e-28!94;UBERON:0001016!2.29e-28!94;UBERON:0000955!4.06e-28!69;UBERON:0006238!4.06e-28!69;UBERON:0003075!3.01e-27!86;UBERON:0007284!3.01e-27!86;UBERON:0002346!1.25e-25!90;UBERON:0003076!4.30e-22!15;UBERON:0003057!4.30e-22!15;UBERON:0002020!7.48e-20!34;UBERON:0003528!7.48e-20!34;UBERON:0002780!1.10e-19!41;UBERON:0001890!1.10e-19!41;UBERON:0006240!1.10e-19!41;UBERON:0001893!1.81e-19!34;UBERON:0003080!4.23e-19!42;UBERON:0002791!5.80e-18!33;UBERON:0002298!9.29e-18!8;UBERON:0001869!5.79e-16!32;UBERON:0004733!9.03e-15!12;UBERON:0002028!9.03e-15!12;UBERON:0007277!9.03e-15!12;UBERON:0000153!1.14e-14!129;UBERON:0007811!1.14e-14!129;UBERON:0000033!1.23e-14!123;UBERON:0002619!1.01e-13!22;UBERON:0004732!1.66e-13!13;UBERON:0003056!3.92e-13!61;UBERON:0004121!1.21e-12!169;UBERON:0000924!3.87e-12!173;UBERON:0006601!3.87e-12!173;UBERON:0000956!8.02e-12!25;UBERON:0000203!8.02e-12!25;UBERON:0000200!1.07e-10!6;UBERON:0002308!2.35e-10!9;UBERON:0000125!2.35e-10!9;UBERON:0001950!2.85e-10!20;UBERON:0000025!4.68e-10!194;UBERON:0001896!5.87e-10!3;UBERON:0005290!5.87e-10!3;UBERON:0010096!5.87e-10!3;UBERON:0002240!7.17e-10!3;UBERON:0000988!8.50e-10!3;UBERON:0006331!1.54e-09!3;UBERON:0000349!4.10e-09!5;UBERON:0002771!1.01e-08!3;UBERON:0001871!2.95e-08!7;UBERON:0004111!3.39e-08!241;UBERON:0002680!5.53e-08!9;UBERON:0001895!5.53e-08!9;UBERON:0010092!5.53e-08!9;UBERON:0000483!3.06e-07!309;UBERON:0002148!4.48e-07!2;UBERON:0009662!4.48e-07!2;UBERON:0000119!4.53e-07!312;UBERON:0002420!4.69e-07!9;UBERON:0007245!4.69e-07!9;UBERON:0010009!4.69e-07!9;UBERON:0010011!4.69e-07!9;UBERON:0000454!4.69e-07!9;UBERON:0000477!4.82e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!8.53e-38!115;UBERON:0001049!3.14e-37!57;UBERON:0005068!3.14e-37!57;UBERON:0006241!3.14e-37!57;UBERON:0007135!3.14e-37!57;UBERON:0001017!2.27e-32!82;UBERON:0005743!1.95e-30!86;UBERON:0002616!2.70e-30!59;UBERON:0000073!2.29e-28!94;UBERON:0001016!2.29e-28!94;UBERON:0000955!4.06e-28!69;UBERON:0006238!4.06e-28!69;UBERON:0003075!3.01e-27!86;UBERON:0007284!3.01e-27!86;UBERON:0002346!1.25e-25!90;UBERON:0003076!4.30e-22!15;UBERON:0003057!4.30e-22!15;UBERON:0002020!7.48e-20!34;UBERON:0003528!7.48e-20!34;UBERON:0002780!1.10e-19!41;UBERON:0001890!1.10e-19!41;UBERON:0006240!1.10e-19!41;UBERON:0001893!1.81e-19!34;UBERON:0003080!4.23e-19!42;UBERON:0002791!5.80e-18!33;UBERON:0002298!9.29e-18!8;UBERON:0001869!5.79e-16!32;UBERON:0004733!9.03e-15!12;UBERON:0002028!9.03e-15!12;UBERON:0007277!9.03e-15!12;UBERON:0000153!1.14e-14!129;UBERON:0007811!1.14e-14!129;UBERON:0000033!1.23e-14!123;UBERON:0002619!1.01e-13!22;UBERON:0004732!1.66e-13!13;UBERON:0003056!3.92e-13!61;UBERON:0004121!1.21e-12!169;UBERON:0000924!3.87e-12!173;UBERON:0006601!3.87e-12!173;UBERON:0000956!8.02e-12!25;UBERON:0000203!8.02e-12!25;UBERON:0000200!1.07e-10!6;UBERON:0002308!2.35e-10!9;UBERON:0000125!2.35e-10!9;UBERON:0001950!2.85e-10!20;UBERON:0000025!4.68e-10!194;UBERON:0001896!5.87e-10!3;UBERON:0005290!5.87e-10!3;UBERON:0010096!5.87e-10!3;UBERON:0002240!7.17e-10!3;UBERON:0000988!8.50e-10!3;UBERON:0006331!1.54e-09!3;UBERON:0000349!4.10e-09!5;UBERON:0002771!1.01e-08!3;UBERON:0001871!2.95e-08!7;UBERON:0004111!3.39e-08!241;UBERON:0002680!5.53e-08!9;UBERON:0001895!5.53e-08!9;UBERON:0010092!5.53e-08!9;UBERON:0000483!3.06e-07!309;UBERON:0002148!4.48e-07!2;UBERON:0009662!4.48e-07!2;UBERON:0000119!4.53e-07!312;UBERON:0002420!4.69e-07!9;UBERON:0007245!4.69e-07!9;UBERON:0010009!4.69e-07!9;UBERON:0010011!4.69e-07!9;UBERON:0000454!4.69e-07!9;UBERON:0000477!4.82e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.86e-116;6!UBERON:0001896;7.21e-85;3!UBERON:0005290;7.21e-85;3!UBERON:0004733;1.28e-58;12!UBERON:0002028;1.28e-58;12!UBERON:0004732;3.66e-54;13!UBERON:0002240;1.12e-38;3!UBERON:0005174;1.12e-38;3!UBERON:0001137;1.12e-38;3!UBERON:0000988;4.25e-38;3!UBERON:0002148;2.21e-15;2!UBERON:0006331;2.21e-15;2!UBERON:0009662;2.21e-15;2!UBERON:0002680;1.85e-13;9!UBERON:0001895;1.85e-13;9!UBERON:0000073;3.24e-09;53!UBERON:0002616;3.24e-09;53!UBERON:0001017;1.62e-08;75 | |ontology_enrichment_uberon_v019=UBERON:0002298;1.86e-116;6!UBERON:0001896;7.21e-85;3!UBERON:0005290;7.21e-85;3!UBERON:0004733;1.28e-58;12!UBERON:0002028;1.28e-58;12!UBERON:0004732;3.66e-54;13!UBERON:0002240;1.12e-38;3!UBERON:0005174;1.12e-38;3!UBERON:0001137;1.12e-38;3!UBERON:0000988;4.25e-38;3!UBERON:0002148;2.21e-15;2!UBERON:0006331;2.21e-15;2!UBERON:0009662;2.21e-15;2!UBERON:0002680;1.85e-13;9!UBERON:0001895;1.85e-13;9!UBERON:0000073;3.24e-09;53!UBERON:0002616;3.24e-09;53!UBERON:0001017;1.62e-08;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.65e-116,6;UBERON:0003076,1.43e-91,15;UBERON:0003057,1.43e-91,15;UBERON:0001896,5.41e-85,3;UBERON:0005290,5.41e-85,3;UBERON:0010096,5.41e-85,3;UBERON:0004733,1.21e-58,12;UBERON:0002028,1.21e-58,12;UBERON:0007277,1.21e-58,12;UBERON:0004732,3.46e-54,13;UBERON:0002240,1.23e-38,3;UBERON:0005174,1.23e-38,3;UBERON:0001137,1.23e-38,3;UBERON:0000988,4.67e-38,3;UBERON:0001049,1.82e-24,56;UBERON:0005068,1.82e-24,56;UBERON:0006241,1.82e-24,56;UBERON:0007135,1.82e-24,56;UBERON:0001017,6.63e-17,81;UBERON:0003075,6.63e-17,82;UBERON:0007284,6.63e-17,82;UBERON:0002346,3.85e-16,86;UBERON:0002148,2.37e-15,2;UBERON:0006331,2.37e-15,2;UBERON:0009662,2.37e-15,2;UBERON:0001016,2.81e-15,89;UBERON:0002680,1.91e-13,9;UBERON:0001895,1.91e-13,9;UBERON:0010092,1.91e-13,9;UBERON:0000073,2.01e-13,53;UBERON:0002616,2.01e-13,53;UBERON:0010371,2.04e-13,104;UBERON:0007023,2.25e-12,114;UBERON:0010314,1.24e-10,132;UBERON:0000955,1.97e-10,68;UBERON:0006238,1.97e-10,68;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171;UBERON:0000025,2.32e-07,192 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.67401132980677,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,2.86704597845036,3.99344585532668,8.56930360591092,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,1.63127359144396,0.197318320688547,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14093547383912,4.1586496045792,0.8453114551668,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.67401132980677,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,2.86704597845036,3.99344585532668,8.56930360591092,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,1.63127359144396,0.197318320688547,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14093547383912,4.1586496045792,0.8453114551668,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:69741832..69741847,- | |short_description=p@chr2:69741832..69741847,- | ||
}} | }} |
Latest revision as of 11:44, 29 July 2015
Short description: | p@chr2:69741832..69741847, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:69741832..69741847, - |
Coexpression cluster: | C1678_medulla_spinal_locus_pons_corpus_globus_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data