FFCP PHASE1:Hg19::chr2:88905814..88905819,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:88905814..88905819,- | |||
|coexpression_cluster_id=C622 | |||
|description=CAGE_peak_at_chr2:88905814..88905819,- | |||
|id=chr2:88905814..88905819,- | |||
|ontology_enrichment_celltype=CL:0000838!1.79e-10!52;CL:0000542!4.57e-10!53;CL:0000051!4.57e-10!53;CL:0000738!7.81e-09!140;CL:0002087!8.03e-09!119;CL:0000945!1.59e-08!24;CL:0000826!1.59e-08!24;CL:0000037!5.11e-08!172;CL:0000566!5.11e-08!172;CL:0002032!1.50e-07!165;CL:0000837!1.50e-07!165;CL:0002031!1.64e-07!124;CL:0000988!5.58e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.83e-18;13!CL:0000542;2.95e-13;53!CL:0000945;4.75e-13;24!CL:0002393;4.16e-11;6!CL:0002397;4.16e-11;6!CL:0000226;7.01e-10;3!CL:0000842;7.01e-10;3!CL:0000623;1.17e-09;3!CL:0000791;4.43e-09;18!CL:0000789;4.43e-09;18!CL:0002419;4.43e-09;18!CL:0002087;6.52e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.59e-26,115;CL:0000838,1.68e-22,52;CL:0000542,5.03e-22,53;CL:0000051,5.03e-22,53;CL:0000738,1.31e-21,136;CL:0002031,1.85e-20,120;CL:0000236,3.96e-17,14;CL:0000037,1.11e-16,168;CL:0000988,1.30e-15,177;CL:0002032,3.10e-14,161;CL:0000837,3.10e-14,161;CL:0000945,4.50e-13,24;CL:0000826,4.50e-13,24;CL:0000226,8.58e-10,3;CL:0000842,8.58e-10,3;CL:0000623,1.07e-09,3;CL:0000825,1.07e-09,3;CL:0000791,4.10e-09,18;CL:0000789,4.10e-09,18;CL:0002420,4.10e-09,18;CL:0002419,4.10e-09,18;CL:0000790,4.10e-09,18;CL:0002393,1.43e-07,9;CL:0002397,1.43e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;2.95e-13;53!CL:0000790;4.43e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;7.33e-08;1!UBERON:0007195;7.33e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,5.05e-08,1;UBERON:0007195,9.29e-08,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.164201178899891,0.0787107813136792,0.393364276848904,0,0.928896739896456,0,0,0,0.697204805222715,0.568676929949686,0,6.64794490238253,6.41742231904453,2.60413044859022,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,1.37898272294647,1.29096936716765,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0,0.622822248995575,0.502497330513487,0.521482918420201,0,0,0,0,0.422510572623884,0,0,0.336985893439485,0,0,0,0,0,0,0,0,1.28019066769952,0.400395987036012,2.87376219977242,1.32208974556972,0.954053754535364,6.26134266020393,5.28513470433845,6.49864487812889,0,0,0,2.360517241366,1.96505381374582,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,1.61285394579786,1.06976078313403,2.46201486600758,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,2.14641561874808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,4.21667878966063,0,0,0,0,0,0,0,1.18218456121156,0.646882724578552,1.66845947163673,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.80428461064202,0.640365346820666,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0,0,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.719489830333259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.459446800413919,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0.213425530045242,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0.211125408127993,0,0.828851746593443,0.251932747854276,0,1.35393286007176,0,0.0898683511473268,0.179021174675609,0.511572370226872,0.493217028184668,2.3948309234694,1.11136990144637,0,0,0,0.260427761085233,0.262379999988587,0,0,0.254253650292766,0.472775363535873,0.344743373241465,0.583209226766509,0.347249989866585,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0.503464760927528,0.569261198172555,0.317873157960757,0,0.979396848954886,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0.364909578431332,0.391329237864179,0,0,0,0.61214552326098,0.31593289814244,0.150323419414493,0,0,0,0.313932918407225,0,0.569219092059585,0.138674673013139,0,0,0.261177619741208,0,0,0,0,0,0.0969890164884194,0.264768380074501,0,0,0.19871461170299,0,0.391102765469606,0.160317640503067,0.213452994739353,0,0,0.229073192331831,0.343189995723929,0,0.372757606696298,0,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0.788662062837943,1.67569440763353,0,0.717873024576814,0,0,0.669514372325618,0.335917362433631,0,0,0.157566364614447,0.247247575143499,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0,0.412618309791701,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.226624183040251,0.58620893471233,0,0,0,0.513260513652988,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,1.798532254171,0,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0.345430341731199,0,0,0,0.132864840313363,0.327130788511688,0.327609848846413,0.983091635014877,0,0.999936979274649,0.106691729694141,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0.558644917973244,0.318004350653419,0.867479195013787,0,0.352675943690684,0.918736432059601,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0.235939446695481,0,0,0.762764190934334,0.690359926060101,0,0.0752103283492573,0,0,0.261906694481422,0,0.443568258651136,0.0675375846183947,0,0,0,0.546974809018219,0.548257766857182,0.992422356778588,0.351742488719241,0,0,0,0,0,0.266107110487916,0,0,0,0.131545547125698,0,0.222462803784138,0.156986185701028,0.157115589916002,0.280272163313789,0.913158720509496,0,0.47775168788705,0,0,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0.423387050190929,0.68732060563215,0,0,0.894843454382338,0.196300467230486,0.121917924982269,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0.356760272332706,0,0.659643100472575,0,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0.469919589899268,0.128915775947154,0.399764623699716,0.357107877211315,0,0,0.730336388246517,0.917458566809082,0,0.157771562193185,0,0,1.0580536810308,0,0,0,0.504665699340316,0,0.126698501011437,0.203977659483963,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0.476128862927481,0.193766729508018,0,0,0.0636471582781649,1.0105859447911,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0.244209805832924,0.533636729388577,0,0,0,0.122241444182866,0.406896178315738,0,0,0.961705476909699 | |||
|short_description=p@chr2:88905814..88905819,- | |||
}} |
Latest revision as of 13:02, 29 July 2015
Short description: | p@chr2:88905814..88905819, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:88905814..88905819, - |
Coexpression cluster: | C622_CD19_CD14_immature_Peripheral_Neutrophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.59e-26 | 115 |
lymphoid lineage restricted progenitor cell | 1.68e-22 | 52 |
lymphocyte | 5.03e-22 | 53 |
common lymphoid progenitor | 5.03e-22 | 53 |
leukocyte | 1.31e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 1.85e-20 | 120 |
B cell | 3.96e-17 | 14 |
hematopoietic stem cell | 1.11e-16 | 168 |
hematopoietic cell | 1.30e-15 | 177 |
hematopoietic oligopotent progenitor cell | 3.10e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.10e-14 | 161 |
lymphocyte of B lineage | 4.50e-13 | 24 |
pro-B cell | 4.50e-13 | 24 |
single nucleate cell | 8.58e-10 | 3 |
mononuclear cell | 8.58e-10 | 3 |
natural killer cell | 1.07e-09 | 3 |
pro-NK cell | 1.07e-09 | 3 |
mature alpha-beta T cell | 4.10e-09 | 18 |
alpha-beta T cell | 4.10e-09 | 18 |
immature T cell | 4.10e-09 | 18 |
mature T cell | 4.10e-09 | 18 |
immature alpha-beta T cell | 4.10e-09 | 18 |
intermediate monocyte | 1.43e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.43e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 5.05e-08 | 1 |
stroma of bone marrow | 9.29e-08 | 1 |