FFCP PHASE1:Hg19::chr2:89156853..89156874,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:89156853..89156874,- | |||
|coexpression_cluster_id=C481 | |coexpression_cluster_id=C481 | ||
|description=CAGE_peak_at_chr2:89156853..89156874,- | |description=CAGE_peak_at_chr2:89156853..89156874,- | ||
|id=chr2:89156853..89156874,- | |id=chr2:89156853..89156874,- | ||
|ontology_enrichment_celltype=CL:0000236!1.57e-22!14;CL:0000945!1.42e-21!24;CL:0000826!1.42e-21!24;CL:0000838!3.10e-12!52;CL:0000542!6.65e-12!53;CL:0000051!6.65e-12!53;CL:0002087!1.01e-07!119;CL:0002619!4.76e-07!3;CL:0000784!8.62e-07!3;CL:0000738!9.61e-07!140 | |ontology_enrichment_celltype=CL:0000236!1.57e-22!14;CL:0000945!1.42e-21!24;CL:0000826!1.42e-21!24;CL:0000838!3.10e-12!52;CL:0000542!6.65e-12!53;CL:0000051!6.65e-12!53;CL:0002087!1.01e-07!119;CL:0002619!4.76e-07!3;CL:0000784!8.62e-07!3;CL:0000738!9.61e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.16e-34;24!CL:0000236;1.15e-31;13!CL:0000542;2.91e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.87e-35,14;CL:0000945,1.92e-34,24;CL:0000826,1.92e-34,24;CL:0000838,8.68e-14,52;CL:0000542,1.86e-13,53;CL:0000051,1.86e-13,53;CL:0000785,3.01e-08,2;CL:0000955,3.01e-08,2;CL:0000818,3.01e-08,2;CL:0000954,3.01e-08,2;CL:0000816,3.01e-08,2;CL:0002087,3.10e-08,115;CL:0002031,1.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.91e-10;53!UBERON:0006965;1.67e-08;2!CL:0000954;2.90e-08;2!UBERON:0006595;3.34e-07;86 | |||
|ontology_enrichment_disease=DOID:0060058!1.24e-07!10 | |ontology_enrichment_disease=DOID:0060058!1.24e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.81e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.76e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.69e-36!115;UBERON:0000178!9.83e-08!15;UBERON:0000179!9.83e-08!15;UBERON:0000463!9.83e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!6.69e-36!115;UBERON:0000178!9.83e-08!15;UBERON:0000179!9.83e-08!15;UBERON:0000463!9.83e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.39e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.63e-23,114;UBERON:0001829,1.50e-08,2;UBERON:0004921,3.07e-08,118 | |||
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| ||
|short_description=p@chr2:89156853..89156874,- | |short_description=p@chr2:89156853..89156874,- | ||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p@chr2:89156853..89156874, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:89156853..89156874, - |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.87e-35 | 14 |
lymphocyte of B lineage | 1.92e-34 | 24 |
pro-B cell | 1.92e-34 | 24 |
lymphoid lineage restricted progenitor cell | 8.68e-14 | 52 |
lymphocyte | 1.86e-13 | 53 |
common lymphoid progenitor | 1.86e-13 | 53 |
mature B cell | 3.01e-08 | 2 |
pre-B-II cell | 3.01e-08 | 2 |
transitional stage B cell | 3.01e-08 | 2 |
small pre-B-II cell | 3.01e-08 | 2 |
immature B cell | 3.01e-08 | 2 |
nongranular leukocyte | 3.10e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.63e-23 | 114 |
major salivary gland | 1.50e-08 | 2 |
subdivision of digestive tract | 3.07e-08 | 118 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.76e-08 | 10 |