FFCP PHASE1:Hg19::chr3:100468772..100468781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:100468772..100468781,- | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100468772..100468781,- | |description=CAGE_peak_at_chr3:100468772..100468781,- | ||
|id=chr3:100468772..100468781,- | |id=chr3:100468772..100468781,- | ||
|ontology_enrichment_celltype=CL:0000055!3.07e-07!180;CL:0000057!7.40e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.07e-07!180;CL:0000057!7.40e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.46e-15;9!CL:0000447;2.46e-15;9!CL:0000138;3.35e-13;6!CL:0002591;1.30e-09;1!CL:0000569;2.12e-09;4!CL:0000327;2.86e-09;15!CL:0002595;1.55e-07;5!CL:0000499;2.14e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.08e-15,9;CL:0000447,3.08e-15,9;CL:0000058,4.31e-13,6;CL:0000138,4.31e-13,6;CL:0002591,1.91e-09,1;CL:0000569,2.08e-09,4;CL:0000011,2.08e-09,4;CL:0000327,3.26e-09,15;CL:0002595,1.55e-07,5;CL:0000499,2.38e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.30e-09;1!UBERON:0003099;1.30e-09;1!UBERON:0003852;1.30e-09;1!CL:0000011;2.12e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!5.22e-09!14 | |ontology_enrichment_disease=DOID:2394!5.22e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2513;4.08e-10;1!DOID:3112;1.30e-09;1!DOID:3369;1.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.09e-10,1;DOID:3369,8.91e-10,1;DOID:3112,1.36e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.49e-07!5;UBERON:0004532!1.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.30e-09;1!UBERON:0005705;1.30e-09;1!UBERON:0008811;1.30e-09;1!UBERON:0008193;1.30e-09;1!UBERON:0010912;1.30e-09;1!UBERON:0002514;1.30e-09;1!UBERON:0003457;1.30e-09;1!UBERON:0008907;1.30e-09;1!UBERON:0008001;1.30e-09;1!UBERON:0007213;1.30e-09;1!UBERON:0009891;1.30e-09;1!UBERON:0007914;1.30e-09;1!UBERON:0007375;1.30e-09;1!UBERON:0003323;1.30e-09;1!UBERON:0010258;1.30e-09;1!UBERON:0005253;1.30e-09;1!UBERON:0007842;1.30e-09;1!UBERON:0002397;1.30e-09;1!UBERON:0003113;1.30e-09;1!UBERON:0003277;1.30e-09;1!UBERON:0001709;1.30e-09;1!UBERON:0002244;1.30e-09;1!UBERON:0005620;1.30e-09;1!UBERON:0010364;1.30e-09;1!UBERON:0004288;1.30e-09;1!UBERON:0003834;1.55e-07;5!UBERON:0001533;1.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,9.70e-10,1;UBERON:0008811,9.70e-10,1;UBERON:0006258,9.70e-10,1;UBERON:0005876,9.70e-10,1;UBERON:0004874,9.70e-10,1;UBERON:0005705,2.26e-09,1;UBERON:0008193,2.26e-09,1;UBERON:0010912,2.26e-09,1;UBERON:0002514,2.26e-09,1;UBERON:0003457,2.26e-09,1;UBERON:0008907,2.26e-09,1;UBERON:0008001,2.26e-09,1;UBERON:0007213,2.26e-09,1;UBERON:0009891,2.26e-09,1;UBERON:0007914,2.26e-09,1;UBERON:0009292,2.26e-09,1;UBERON:0003099,2.26e-09,1;UBERON:0007375,2.26e-09,1;UBERON:0003323,2.26e-09,1;UBERON:0010258,2.26e-09,1;UBERON:0007842,2.26e-09,1;UBERON:0009494,2.26e-09,1;UBERON:0010042,2.26e-09,1;UBERON:0010045,2.26e-09,1;UBERON:0010259,2.26e-09,1;UBERON:0010359,2.26e-09,1;UBERON:0009526,2.26e-09,1;UBERON:0002397,2.26e-09,1;UBERON:0003113,2.26e-09,1;UBERON:0003277,2.26e-09,1;UBERON:0001709,2.26e-09,1;UBERON:0004066,2.26e-09,1;UBERON:0002244,2.26e-09,1;UBERON:0005620,2.26e-09,1;UBERON:0004362,2.26e-09,1;UBERON:0010364,2.26e-09,1;UBERON:0010046,2.26e-09,1;UBERON:0005868,2.26e-09,1;UBERON:0007238,2.26e-09,1;UBERON:0004288,2.26e-09,1;UBERON:0004068,2.26e-09,1;UBERON:0010334,2.26e-09,1;UBERON:0003852,2.26e-09,1;UBERON:0010253,2.26e-09,1;UBERON:0003834,1.55e-07,5;UBERON:0001533,1.55e-07,5 | |||
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| ||
|short_description=p@chr3:100468772..100468781,- | |short_description=p@chr3:100468772..100468781,- | ||
}} | }} |
Latest revision as of 13:38, 29 July 2015
Short description: | p@chr3:100468772..100468781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100468772..100468781, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.08e-15 | 9 |
carbohydrate secreting cell | 3.08e-15 | 9 |
chondroblast | 4.31e-13 | 6 |
chondrocyte | 4.31e-13 | 6 |
smooth muscle cell of the pulmonary artery | 1.91e-09 | 1 |
cardiac mesenchymal cell | 2.08e-09 | 4 |
migratory trunk neural crest cell | 2.08e-09 | 4 |
extracellular matrix secreting cell | 3.26e-09 | 15 |
smooth muscle cell of the subclavian artery | 1.55e-07 | 5 |
stromal cell | 2.38e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.09e-10 | 1 |
peripheral primitive neuroectodermal tumor | 8.91e-10 | 1 |
papillary adenocarcinoma | 1.36e-09 | 1 |