FFCP PHASE1:Hg19::chr3:100551992..100552008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:100551992..100552008,- | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100551992..100552008,- | |description=CAGE_peak_at_chr3:100551992..100552008,- | ||
|id=chr3:100551992..100552008,- | |id=chr3:100551992..100552008,- | ||
|ontology_enrichment_celltype=CL:0000057!1.65e-11!75;CL:0000055!3.09e-11!180;CL:0002620!6.34e-08!23 | |ontology_enrichment_celltype=CL:0000057!1.65e-11!75;CL:0000055!3.09e-11!180;CL:0002620!6.34e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000197;6.32e-12;6!CL:0000098;6.32e-12;6!CL:0002167;6.32e-12;6!CL:0000569;3.05e-11;4!CL:0000153;1.26e-08;9!CL:0000447;1.26e-08;9!CL:0000723;6.18e-08;61!CL:0000048;1.24e-07;58!CL:0000327;1.39e-07;15!CL:0000134;1.90e-07;55!CL:0000214;2.02e-07;3!CL:0002092;2.25e-07;10!CL:0002540;2.30e-07;6!CL:0002494;4.68e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,5.66e-12,6;CL:0000098,5.66e-12,6;CL:0002167,5.66e-12,6;CL:0000569,3.18e-11,4;CL:0000011,3.18e-11,4;CL:0000153,9.97e-09,9;CL:0000447,9.97e-09,9;CL:0000327,1.35e-07,15;CL:0000214,1.82e-07,3;CL:0002092,2.68e-07,10;CL:0002540,3.77e-07,6;CL:0002494,5.43e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000011;3.05e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.59e-07!95 | |ontology_enrichment_uberon=UBERON:0003102!5.59e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.02e-07;3!UBERON:0007616;2.02e-07;3!UBERON:0002217;2.02e-07;3!UBERON:0002018;2.02e-07;3!UBERON:0000948;5.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,1.98e-08,24;UBERON:0005498,1.98e-08,24;UBERON:0004140,1.98e-08,24;UBERON:0009881,1.98e-08,24;UBERON:0004141,1.98e-08,24;UBERON:0003084,1.98e-08,24;UBERON:0007005,1.98e-08,24;UBERON:0004139,1.98e-08,24;UBERON:0004291,1.98e-08,24;UBERON:0006915,1.82e-07,3;UBERON:0007616,1.82e-07,3;UBERON:0002217,1.82e-07,3;UBERON:0002018,1.82e-07,3;UBERON:0007100,2.18e-07,27 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,11.9274920286907,0.50133791063589,1.59331170856906,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,2.51577443545116,0.573673241497627,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0.896692083310806,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0.612975591598039,0.751190294532984,0,1.25572744982203,0,0.211931901159562,0,0.103052529238439,1.28820270022815,0.18611685633159,0.168776332241266,0,0.504867548488229,0.0920498986422993,0.161646056818812,1.42003837006646,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,3.57656445851882,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,1.96271887676878,1.57702415033935,1.05427273493442,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0.616838775210622,0.710246901252508,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0.464845549297286,3.1481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43713489631284,0,0.136499911407986,0,2.26016233240486,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,2.9555068941673,12.5132059324763,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,1.53580351049616,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,2.17727711363265,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0.429765441419957,0,0.837847203816763,1.14580212005842,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,1.24271716604159,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.66441758450784,1.13641803165053,1.0062716070103,3.55924488638614,5.72100170992309,3.17584939902802,0.466311601748341,1.33069634990671,0.159296767163702,1.34940933649081,0.310525913752519,0.829412415681711,1.86089200190596,0,0.450772826991655,0.761610424337591,0,0,0.214821114084977,0,1.19428766609585,0.800055529326307,0,0,0,0,0,0,0.680117776536817,0,0.244736704506468,1.96997725189636,0,0,0,0,0.675769762612291,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0.300841313397029,0,0,0,0.982631505060581,0,0,0,0,0,0,0.548257766857182,2.48105589194647,0,0.255524855279191,0,0,0,0,0,0,0.342976018874837,0,0,0,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,1.53646629384555,0,0,0.591660003652827,0.340853619036631,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0.118920090777569,0,0,0,0,0,0,0.735444965261716,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0,0.743990036333503,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0,0.535928260312357,0,0.103432995861895,0.213233981900981,0,0,0,0.33639558774184,0.0636471582781649,1.61693751166575,0,1.02669990325584,0.0673520530145875,0,0.665320713092027,0,0.426909383510862,0,0,0,0.122241444182866,0,0,0.402547587182052,0 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| ||
|short_description=p@chr3:100551992..100552008,- | |short_description=p@chr3:100551992..100552008,- | ||
}} | }} |
Latest revision as of 13:40, 29 July 2015
Short description: | p@chr3:100551992..100552008, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100551992..100552008, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 5.66e-12 | 6 |
sensory epithelial cell | 5.66e-12 | 6 |
olfactory epithelial cell | 5.66e-12 | 6 |
cardiac mesenchymal cell | 3.18e-11 | 4 |
migratory trunk neural crest cell | 3.18e-11 | 4 |
GAG secreting cell | 9.97e-09 | 9 |
carbohydrate secreting cell | 9.97e-09 | 9 |
extracellular matrix secreting cell | 1.35e-07 | 15 |
synovial cell | 1.82e-07 | 3 |
bone marrow cell | 2.68e-07 | 10 |
mesenchymal stem cell of the bone marrow | 3.77e-07 | 6 |
cardiocyte | 5.43e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
heart | 1.98e-08 | 24 |
primitive heart tube | 1.98e-08 | 24 |
primary heart field | 1.98e-08 | 24 |
anterior lateral plate mesoderm | 1.98e-08 | 24 |
heart tube | 1.98e-08 | 24 |
heart primordium | 1.98e-08 | 24 |
cardiac mesoderm | 1.98e-08 | 24 |
cardiogenic plate | 1.98e-08 | 24 |
heart rudiment | 1.98e-08 | 24 |
stratified squamous epithelium | 1.82e-07 | 3 |
layer of synovial tissue | 1.82e-07 | 3 |
synovial joint | 1.82e-07 | 3 |
synovial membrane of synovial joint | 1.82e-07 | 3 |
primary circulatory organ | 2.18e-07 | 27 |