FFCP PHASE1:Hg19::chr3:107201513..107201523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:107201513..107201523,- | |||
|coexpression_cluster_id=C245 | |coexpression_cluster_id=C245 | ||
|description=CAGE_peak_at_chr3:107201513..107201523,- | |description=CAGE_peak_at_chr3:107201513..107201523,- | ||
|id=chr3:107201513..107201523,- | |id=chr3:107201513..107201523,- | ||
|ontology_enrichment_celltype=CL:0002541;8.69e-18;3 | |ontology_enrichment_celltype=CL:0002541!2.94e-23!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;8.69e-18;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.46e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.10e-50;1!UBERON:0007297;6.30e-26;2!UBERON:0009847;8.69e-18;3!UBERON:0003353;8.69e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0006947;3.35e-66;3!UBERON:0004054;3.35e-66;3!UBERON:0001000;3.10e-50;1!UBERON:0000998;3.10e-50;1!UBERON:0006868;3.10e-50;1!UBERON:0005352;3.10e-50;1!UBERON:0005904;5.13e-50;4!UBERON:0003101;4.42e-21;22!UBERON:0000079;4.42e-21;22!UBERON:0000058;8.54e-21;10!UBERON:0003135;5.14e-19;11!UBERON:0003124;8.69e-18;3!UBERON:0000920;8.69e-18;3!UBERON:0003937;1.57e-17;12!UBERON:0005399;1.57e-17;12!UBERON:0004175;1.69e-10;21!UBERON:0000473;1.64e-07;8 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.35e-23!3;UBERON:0004054!2.35e-23!3;UBERON:0000476!2.94e-23!3;UBERON:0000920!2.94e-23!3;UBERON:0003124!5.69e-22!7;UBERON:0005631!2.94e-19!14;UBERON:0000158!2.94e-19!14;UBERON:0001000!3.16e-18!1;UBERON:0005352!3.16e-18!1;UBERON:0000998!4.44e-18!1;UBERON:0006868!4.44e-18!1;UBERON:0005904!8.74e-18!4;UBERON:0006834!1.22e-17!1;UBERON:0002581!1.70e-17!1;UBERON:0004175!1.46e-16!25;UBERON:0000478!2.19e-11!24;UBERON:0005156!6.16e-10!59;UBERON:0000990!6.16e-10!59;UBERON:0003133!1.19e-08!48;UBERON:0007023!1.25e-08!115;UBERON:0000995!1.31e-07!21;UBERON:0003101!1.66e-07!22;UBERON:0000079!1.66e-07!22;UBERON:0005795!2.75e-07!22;UBERON:0003975!2.75e-07!22;UBERON:0003135!4.71e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.35e-66;3!UBERON:0004054;3.35e-66;3!UBERON:0001000;3.10e-50;1!UBERON:0000998;3.10e-50;1!UBERON:0006868;3.10e-50;1!UBERON:0005352;3.10e-50;1!UBERON:0005904;5.13e-50;4!UBERON:0003101;4.42e-21;22!UBERON:0000079;4.42e-21;22!UBERON:0000058;8.54e-21;10!UBERON:0003135;5.14e-19;11!UBERON:0003124;8.69e-18;3!UBERON:0000920;8.69e-18;3!UBERON:0003937;1.57e-17;12!UBERON:0005399;1.57e-17;12!UBERON:0004175;1.69e-10;21!UBERON:0000473;1.64e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.68e-66,3;UBERON:0004054,4.68e-66,3;UBERON:0001000,2.42e-50,1;UBERON:0005352,2.42e-50,1;UBERON:0000998,6.58e-50,1;UBERON:0006868,6.58e-50,1;UBERON:0005904,6.60e-50,4;UBERON:0003101,4.27e-21,22;UBERON:0000079,4.27e-21,22;UBERON:0003135,5.63e-19,11;UBERON:0000920,9.46e-18,3;UBERON:0003937,1.57e-17,12;UBERON:0005399,1.57e-17,12;UBERON:0000058,1.81e-11,19;UBERON:0004175,5.71e-09,25;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0003124,2.18e-08,7;UBERON:0003064,3.92e-08,28;UBERON:0000473,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p@chr3:107201513..107201523,- | |short_description=p@chr3:107201513..107201523,- | ||
}} | }} |
Latest revision as of 14:01, 29 July 2015
Short description: | p@chr3:107201513..107201523, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:107201513..107201523, - |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.68e-66 | 3 |
internal male genitalia | 4.68e-66 | 3 |
vas deferens | 2.42e-50 | 1 |
spermatic cord | 2.42e-50 | 1 |
seminal vesicle | 6.58e-50 | 1 |
seminal fluid secreting gland | 6.58e-50 | 1 |
duct of male reproductive system | 6.60e-50 | 4 |
male organism | 4.27e-21 | 22 |
male reproductive system | 4.27e-21 | 22 |
male reproductive organ | 5.63e-19 | 11 |
egg chorion | 9.46e-18 | 3 |
sex gland | 1.57e-17 | 12 |
male reproductive gland | 1.57e-17 | 12 |
duct | 1.81e-11 | 19 |
internal genitalia | 5.71e-09 | 25 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
chorion | 2.18e-08 | 7 |
intermediate mesoderm | 3.92e-08 | 28 |
testis | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |