FFCP PHASE1:Hg19::chr3:123458560..123458569,-: Difference between revisions
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|id=chr3:123458560..123458569,-
|short_description=p@chr3:123458560..123458569,-
|description=CAGE_peak_at_chr3:123458560..123458569,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:123458560..123458569,- | |||
|description=CAGE_peak_at_chr3:123458560..123458569,- | |||
|id=chr3:123458560..123458569,- | |||
|ontology_enrichment_celltype=CL:0000055!5.75e-16!180;CL:0000144!2.66e-10!625;CL:0000222!9.57e-10!119;CL:0000680!1.44e-09!57;CL:0000056!1.44e-09!57;CL:0000355!1.44e-09!57;CL:0002620!1.61e-09!23;CL:0000192!2.58e-09!42;CL:0000514!2.58e-09!42;CL:0000548!4.87e-08!679;CL:0000004!4.87e-08!679;CL:0000255!4.87e-08!679;CL:0000012!7.25e-08!682;CL:0000187!1.04e-07!54;CL:0000220!1.38e-07!246;CL:0000077!1.57e-07!19;CL:0000057!1.62e-07!75;CL:0002321!2.05e-07!248;CL:0000183!2.08e-07!59;CL:0002371!4.92e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002622;2.91e-16;3!CL:0002620;5.37e-13;23!CL:0000077;1.24e-09;19!CL:0002540;2.26e-08;6!CL:0002580;8.18e-08;3!CL:0002599;6.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.23e-16,3;CL:0002620,4.86e-13,23;CL:0000077,1.22e-09,19;CL:0002540,1.92e-08,6;CL:0002580,1.11e-07,3;CL:0002599,6.23e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.18e-08;3!DOID:127;8.18e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.14e-08,3;DOID:127,7.14e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!7.83e-09!63;UBERON:0001015!7.83e-09!63;UBERON:0000383!7.83e-09!63;UBERON:0001134!1.57e-08!61;UBERON:0002036!1.57e-08!61;UBERON:0003082!1.57e-08!61;UBERON:0000486!9.66e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;7.49e-08;11!UBERON:0010147;7.49e-08;11!UBERON:0003937;3.35e-07;12!UBERON:0005399;3.35e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,5.45e-08,11;UBERON:0010147,5.45e-08,11;UBERON:0009846,5.45e-08,11;UBERON:0003353,5.45e-08,11;UBERON:0004902,5.45e-08,11;UBERON:0003820,5.45e-08,11;UBERON:0009847,5.45e-08,11;UBERON:0003937,2.51e-07,12;UBERON:0005399,2.51e-07,12;UBERON:0003102,2.60e-07,99;UBERON:0002097,8.59e-07,41 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0.665188192387692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.554128230968366,0,0.30648779579902,0,0,1.4351170855109,0,0,2.10063767259082,0.206105058476878,1.54584324027377,0.558350568994769,1.68776332241266,0.292311015483596,2.27190396819703,0.0920498986422993,0,2.13005755509969,1.30977727695932,1.52604533079439,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,2.12750493267896,2.08014873822732,0,0,0.799266537048298,0,0,0,0,0.355391948742546,0,7.23454504943007,1.74306691720059,3.19913571782583,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.184369168541703,1.12948698808508,0,0,0,0,0,0,0,0,0.744323423456331,2.14846762603287,1.12264037773229,0.640695746278505,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,1.95184561879831,2.36718518408732,2.36023946926963,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0.767693373934002,1.28381696410176,0,0,2.15846949099978,0.54907405947211,0.589062011728432,0,0,0,4.38870365180631,0.243713489631284,0,3.8219975194236,0.565621727814851,0,0,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,1.30634944043764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0.149254802886874,0.233713309847224,0,1.7046270474758,2.0125432140206,2.66943366478961,0,0.302461847526478,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0.601030435988874,2.28483127301277,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0.926089897295336,0,1.25362188757041,4.32322026025361,0.438568099157414,0.353378291891762,0,0,0,0,9.41965864149885,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,3.63146558453795,0,1.10057159113007,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,2.31087814315709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0.665188192387692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.554128230968366,0,0.30648779579902,0,0,1.4351170855109,0,0,2.10063767259082,0.206105058476878,1.54584324027377,0.558350568994769,1.68776332241266,0.292311015483596,2.27190396819703,0.0920498986422993,0,2.13005755509969,1.30977727695932,1.52604533079439,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,2.12750493267896,2.08014873822732,0,0,0.799266537048298,0,0,0,0,0.355391948742546,0,7.23454504943007,1.74306691720059,3.19913571782583,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.184369168541703,1.12948698808508,0,0,0,0,0,0,0,0,0.744323423456331,2.14846762603287,1.12264037773229,0.640695746278505,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,1.95184561879831,2.36718518408732,2.36023946926963,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0.767693373934002,1.28381696410176,0,0,2.15846949099978,0.54907405947211,0.589062011728432,0,0,0,4.38870365180631,0.243713489631284,0,3.8219975194236,0.565621727814851,0,0,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,1.30634944043764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0.149254802886874,0.233713309847224,0,1.7046270474758,2.0125432140206,2.66943366478961,0,0.302461847526478,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0.601030435988874,2.28483127301277,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0.926089897295336,0,1.25362188757041,4.32322026025361,0.438568099157414,0.353378291891762,0,0,0,0,9.41965864149885,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,3.63146558453795,0,1.10057159113007,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,2.31087814315709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:123458560..123458569,- | |||
}} | }} |
Latest revision as of 15:10, 29 July 2015
Short description: | p@chr3:123458560..123458569, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:123458560..123458569, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.23e-16 | 3 |
skin fibroblast | 4.86e-13 | 23 |
mesothelial cell | 1.22e-09 | 19 |
mesenchymal stem cell of the bone marrow | 1.92e-08 | 6 |
preadipocyte of the breast | 1.11e-07 | 3 |
smooth muscle cell of the esophagus | 6.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 5.45e-08 | 11 |
male accessory sex gland | 5.45e-08 | 11 |
embryonic cloacal epithelium | 5.45e-08 | 11 |
epithelium of hindgut | 5.45e-08 | 11 |
urogenital sinus epithelium | 5.45e-08 | 11 |
prostate bud | 5.45e-08 | 11 |
prostate field | 5.45e-08 | 11 |
sex gland | 2.51e-07 | 12 |
male reproductive gland | 2.51e-07 | 12 |
surface structure | 2.60e-07 | 99 |
skin of body | 8.59e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.14e-08 | 3 |
leiomyoma | 7.14e-08 | 3 |