FFCP PHASE1:Hg19::chr3:154898430..154898445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:154898430..154898445,+ | |||
|coexpression_cluster_id=C1514 | |coexpression_cluster_id=C1514 | ||
|description=CAGE_peak_at_chr3:154898430..154898445,+ | |description=CAGE_peak_at_chr3:154898430..154898445,+ | ||
|id=chr3:154898430..154898445,+ | |id=chr3:154898430..154898445,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.54e-14!180;CL:0000057!1.61e-12!75;CL:0002620!5.59e-11!23;CL:0000048!1.06e-08!430;CL:0000723!3.71e-08!436;CL:0000034!1.83e-07!444 | |ontology_enrichment_celltype=CL:0000055!9.54e-14!180;CL:0000057!1.61e-12!75;CL:0002620!5.59e-11!23;CL:0000048!1.06e-08!430;CL:0000723!3.71e-08!436;CL:0000034!1.83e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.46e-14;3!CL:0002588;8.42e-10;2!CL:0002561;2.91e-09;2!CL:0002559;6.74e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.91e-14,3;CL:0002588,8.85e-10,2;CL:0002561,2.33e-09,2;CL:0000136,3.47e-09,15;CL:0002559,5.94e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!8.02e-09!45;UBERON:0002416!8.02e-09!45;UBERON:0002097!1.66e-08!40;UBERON:0000914!3.43e-07!83;UBERON:0002329!3.43e-07!83;UBERON:0003077!3.43e-07!83;UBERON:0003059!3.43e-07!83;UBERON:0007282!3.43e-07!83;UBERON:0009618!3.43e-07!83;UBERON:0007285!3.43e-07!83;UBERON:0003102!3.98e-07!95 | |ontology_enrichment_uberon=UBERON:0002199!8.02e-09!45;UBERON:0002416!8.02e-09!45;UBERON:0002097!1.66e-08!40;UBERON:0000914!3.43e-07!83;UBERON:0002329!3.43e-07!83;UBERON:0003077!3.43e-07!83;UBERON:0003059!3.43e-07!83;UBERON:0007282!3.43e-07!83;UBERON:0009618!3.43e-07!83;UBERON:0007285!3.43e-07!83;UBERON:0003102!3.98e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;2.91e-09;2!UBERON:0005942;2.91e-09;2!UBERON:0005932;2.91e-09;2!UBERON:0002073;6.74e-08;5!UBERON:0002199;4.20e-07;46!UBERON:0002416;4.20e-07;46!UBERON:0001013;5.51e-07;14!UBERON:0002097;8.52e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.40e-10,46;UBERON:0002416,4.40e-10,46;UBERON:0005933,2.33e-09,2;UBERON:0005942,2.33e-09,2;UBERON:0005932,2.33e-09,2;UBERON:0002073,5.94e-08,5;UBERON:0005086,5.94e-08,5;UBERON:0002097,6.79e-08,41;UBERON:0001013,4.62e-07,14 | |||
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|short_description=p@chr3:154898430..154898445,+ | |short_description=p@chr3:154898430..154898445,+ | ||
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Latest revision as of 17:21, 29 July 2015
Short description: | p@chr3:154898430..154898445, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:154898430..154898445, + |
Coexpression cluster: | C1514_Neutrophils_Adipocyte_tenocyte_chorionic_Hair_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.91e-14 | 3 |
smooth muscle cell of the umbilical vein | 8.85e-10 | 2 |
outer root sheath cell | 2.33e-09 | 2 |
fat cell | 3.47e-09 | 15 |
hair follicle cell | 5.94e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
integument | 4.40e-10 | 46 |
integumental system | 4.40e-10 | 46 |
hair root sheath | 2.33e-09 | 2 |
hair outer root sheath | 2.33e-09 | 2 |
bulb of hair follicle | 2.33e-09 | 2 |
hair follicle | 5.94e-08 | 5 |
hair follicle placode | 5.94e-08 | 5 |
skin of body | 6.79e-08 | 41 |
adipose tissue | 4.62e-07 | 14 |