FFCP PHASE1:Hg19::chr3:157155622..157155680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:157155622..157155680,+ | |||
|coexpression_cluster_id=C549 | |||
|description=CAGE_peak_at_chr3:157155622..157155680,+ | |description=CAGE_peak_at_chr3:157155622..157155680,+ | ||
|id=chr3:157155622..157155680,+ | |id=chr3:157155622..157155680,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.43e-31!180;CL:0000057!5.20e-20!75;CL:0000048!2.17e-14!430;CL:0000222!6.43e-14!119;CL:0000723!2.02e-13!436;CL:0000034!6.12e-13!444;CL:0000680!4.88e-10!57;CL:0000056!4.88e-10!57;CL:0000355!4.88e-10!57;CL:0000393!9.24e-10!60;CL:0000211!9.24e-10!60;CL:0002371!9.51e-09!591;CL:0000187!1.01e-08!54;CL:0002139!1.26e-08!24;CL:0000144!1.65e-08!625;CL:0000115!5.83e-08!35;CL:0002620!1.33e-07!23;CL:0000183!1.89e-07!59 | |ontology_enrichment_celltype=CL:0000055!8.43e-31!180;CL:0000057!5.20e-20!75;CL:0000048!2.17e-14!430;CL:0000222!6.43e-14!119;CL:0000723!2.02e-13!436;CL:0000034!6.12e-13!444;CL:0000680!4.88e-10!57;CL:0000056!4.88e-10!57;CL:0000355!4.88e-10!57;CL:0000393!9.24e-10!60;CL:0000211!9.24e-10!60;CL:0002371!9.51e-09!591;CL:0000187!1.01e-08!54;CL:0002139!1.26e-08!24;CL:0000144!1.65e-08!625;CL:0000115!5.83e-08!35;CL:0002620!1.33e-07!23;CL:0000183!1.89e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.38e-12;24!CL:0000115;5.82e-09;36!CL:0000071;8.16e-09;18!CL:0002334;1.54e-07;12!CL:0002078;9.12e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.22e-19,76;CL:0000048,1.32e-16,427;CL:0000222,4.03e-16,121;CL:0000723,8.87e-16,433;CL:0000034,3.67e-15,441;CL:0002139,1.90e-12,24;CL:0000115,9.88e-11,36;CL:0000680,1.11e-09,58;CL:0000056,1.11e-09,58;CL:0000355,1.11e-09,58;CL:0002078,3.19e-09,45;CL:0000071,7.86e-09,18;CL:0002546,7.86e-09,18;CL:0000213,1.15e-08,58;CL:0000215,1.15e-08,58;CL:0000187,5.32e-08,55;CL:0002334,1.52e-07,12;CL:0000136,3.04e-07,15;CL:0002320,4.41e-07,361;CL:0000393,4.77e-07,61;CL:0000211,4.77e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;8.16e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.07e-17!79;UBERON:0007798!1.07e-17!79;UBERON:0000055!3.12e-16!69;UBERON:0004535!1.23e-15!110;UBERON:0004872!4.64e-15!84;UBERON:0001009!1.06e-14!113;UBERON:0001981!2.04e-13!60;UBERON:0007500!2.04e-13!60;UBERON:0004537!2.04e-13!60;UBERON:0006965!2.04e-13!60;UBERON:0000914!1.43e-10!83;UBERON:0002329!1.43e-10!83;UBERON:0003077!1.43e-10!83;UBERON:0003059!1.43e-10!83;UBERON:0007282!1.43e-10!83;UBERON:0009618!1.43e-10!83;UBERON:0007285!1.43e-10!83;UBERON:0001637!5.10e-10!42;UBERON:0003509!5.10e-10!42;UBERON:0004572!5.10e-10!42;UBERON:0004290!2.16e-09!70;UBERON:0000468!2.93e-09!659;UBERON:0002385!3.62e-09!63;UBERON:0001015!3.62e-09!63;UBERON:0000383!3.62e-09!63;UBERON:0001134!4.54e-09!61;UBERON:0002036!4.54e-09!61;UBERON:0003082!4.54e-09!61;UBERON:0002204!3.59e-08!167;UBERON:0000486!1.19e-07!82;UBERON:0004573!1.65e-07!33;UBERON:0004571!1.65e-07!33;UBERON:0000467!1.84e-07!625;UBERON:0003914!2.40e-07!118;UBERON:0000480!2.60e-07!626;UBERON:0001013!4.53e-07!14 | |ontology_enrichment_uberon=UBERON:0002049!1.07e-17!79;UBERON:0007798!1.07e-17!79;UBERON:0000055!3.12e-16!69;UBERON:0004535!1.23e-15!110;UBERON:0004872!4.64e-15!84;UBERON:0001009!1.06e-14!113;UBERON:0001981!2.04e-13!60;UBERON:0007500!2.04e-13!60;UBERON:0004537!2.04e-13!60;UBERON:0006965!2.04e-13!60;UBERON:0000914!1.43e-10!83;UBERON:0002329!1.43e-10!83;UBERON:0003077!1.43e-10!83;UBERON:0003059!1.43e-10!83;UBERON:0007282!1.43e-10!83;UBERON:0009618!1.43e-10!83;UBERON:0007285!1.43e-10!83;UBERON:0001637!5.10e-10!42;UBERON:0003509!5.10e-10!42;UBERON:0004572!5.10e-10!42;UBERON:0004290!2.16e-09!70;UBERON:0000468!2.93e-09!659;UBERON:0002385!3.62e-09!63;UBERON:0001015!3.62e-09!63;UBERON:0000383!3.62e-09!63;UBERON:0001134!4.54e-09!61;UBERON:0002036!4.54e-09!61;UBERON:0003082!4.54e-09!61;UBERON:0002204!3.59e-08!167;UBERON:0000486!1.19e-07!82;UBERON:0004573!1.65e-07!33;UBERON:0004571!1.65e-07!33;UBERON:0000467!1.84e-07!625;UBERON:0003914!2.40e-07!118;UBERON:0000480!2.60e-07!626;UBERON:0001013!4.53e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.40e-10;42!UBERON:0003509;4.40e-10;42!UBERON:0004572;4.40e-10;42!UBERON:0007500;1.17e-09;56!UBERON:0001981;1.17e-09;56!UBERON:0004537;1.17e-09;56!UBERON:0000055;5.28e-09;65!UBERON:0006914;7.12e-09;25!UBERON:0004638;8.16e-09;18!UBERON:0001986;8.16e-09;18!UBERON:0004852;8.16e-09;18!UBERON:0001013;2.76e-08;14!UBERON:0004573;6.46e-08;33!UBERON:0004571;6.46e-08;33!UBERON:0004457;8.87e-08;9!UBERON:0000042;8.87e-08;9!UBERON:0000487;1.12e-07;22!UBERON:0001473;4.21e-07;8!UBERON:0004536;4.21e-07;8!UBERON:0006558;4.21e-07;8!UBERON:0002049;5.05e-07;75!UBERON:0007798;5.05e-07;75!UBERON:0003688;9.71e-07;6!UBERON:0002358;9.71e-07;6!UBERON:0003684;9.71e-07;6!UBERON:0001178;9.71e-07;6 | |||
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| ||
|short_description=p@chr3:157155622..157155680,+ | |short_description=p@chr3:157155622..157155680,+ | ||
}} | }} |
Latest revision as of 17:33, 29 July 2015
Short description: | p@chr3:157155622..157155680, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:157155622..157155680, + |
Coexpression cluster: | C549_mesenchymal_Fibroblast_Synoviocyte_Hair_Smooth_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.22e-19 | 76 |
multi fate stem cell | 1.32e-16 | 427 |
mesodermal cell | 4.03e-16 | 121 |
somatic stem cell | 8.87e-16 | 433 |
stem cell | 3.67e-15 | 441 |
endothelial cell of vascular tree | 1.90e-12 | 24 |
endothelial cell | 9.88e-11 | 36 |
muscle precursor cell | 1.11e-09 | 58 |
myoblast | 1.11e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-09 | 58 |
meso-epithelial cell | 3.19e-09 | 45 |
blood vessel endothelial cell | 7.86e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.86e-09 | 18 |
lining cell | 1.15e-08 | 58 |
barrier cell | 1.15e-08 | 58 |
muscle cell | 5.32e-08 | 55 |
preadipocyte | 1.52e-07 | 12 |
fat cell | 3.04e-07 | 15 |
connective tissue cell | 4.41e-07 | 361 |
electrically responsive cell | 4.77e-07 | 61 |
electrically active cell | 4.77e-07 | 61 |