FFCP PHASE1:Hg19::chr3:157160656..157160698,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:157160656..157160698,-
|short_description=p@chr3:157160656..157160698,-
|description=CAGE_peak_at_chr3:157160656..157160698,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:157160656..157160698,- | |||
|coexpression_cluster_id=C549 | |||
|description=CAGE_peak_at_chr3:157160656..157160698,- | |||
|id=chr3:157160656..157160698,- | |||
|ontology_enrichment_celltype=CL:0000055!4.71e-37!180;CL:0000048!2.41e-26!430;CL:0000057!2.92e-25!75;CL:0000723!4.26e-25!436;CL:0002371!3.12e-24!591;CL:0000034!1.69e-23!444;CL:0000144!4.79e-23!625;CL:0000680!5.06e-20!57;CL:0000056!5.06e-20!57;CL:0000355!5.06e-20!57;CL:0000548!1.46e-19!679;CL:0000004!1.46e-19!679;CL:0000255!1.46e-19!679;CL:0000012!4.09e-19!682;CL:0000222!1.85e-18!119;CL:0000187!4.46e-18!54;CL:0000183!3.72e-17!59;CL:0000393!9.66e-17!60;CL:0000211!9.66e-17!60;CL:0000003!2.09e-14!722;CL:0000192!4.02e-13!42;CL:0000514!4.02e-13!42;CL:0000359!1.59e-10!32;CL:0002320!2.01e-10!365;CL:0002620!2.76e-09!23;CL:0000134!2.92e-09!358;CL:0002494!2.19e-08!16;CL:0000219!8.98e-08!390;CL:0002139!1.23e-07!24;CL:0002334!5.52e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.10e-10;55!CL:0000393;3.43e-10;61!CL:0000211;3.43e-10;61!CL:0000192;1.25e-09;43!CL:0000359;6.65e-09;32!CL:0002494;1.19e-08;16!CL:0002334;7.28e-08;12!CL:0002139;1.24e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.34e-20,427;CL:0000680,9.35e-20,58;CL:0000056,9.35e-20,58;CL:0000355,9.35e-20,58;CL:0000723,1.83e-19,433;CL:0000034,1.64e-18,441;CL:0000187,3.10e-18,55;CL:0000222,5.81e-18,121;CL:0000393,1.00e-17,61;CL:0000211,1.00e-17,61;CL:0000057,2.61e-17,76;CL:0000192,6.48e-13,43;CL:0000514,6.48e-13,43;CL:0000359,9.14e-10,32;CL:0002494,1.53e-08,16;CL:0002334,1.02e-07,12;CL:0002139,1.22e-07,24;CL:0000136,9.00e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;2.10e-11;58!CL:0000514;1.25e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.53e-19!70;UBERON:0000914!4.96e-19!83;UBERON:0002329!4.96e-19!83;UBERON:0003077!4.96e-19!83;UBERON:0003059!4.96e-19!83;UBERON:0007282!4.96e-19!83;UBERON:0009618!4.96e-19!83;UBERON:0007285!4.96e-19!83;UBERON:0002049!5.40e-19!79;UBERON:0007798!5.40e-19!79;UBERON:0001134!2.74e-18!61;UBERON:0002036!2.74e-18!61;UBERON:0003082!2.74e-18!61;UBERON:0004535!2.97e-18!110;UBERON:0001009!1.03e-17!113;UBERON:0000486!3.08e-17!82;UBERON:0002385!3.73e-17!63;UBERON:0001015!3.73e-17!63;UBERON:0000383!3.73e-17!63;UBERON:0004872!5.37e-16!84;UBERON:0000055!7.77e-16!69;UBERON:0001637!9.36e-15!42;UBERON:0003509!9.36e-15!42;UBERON:0004572!9.36e-15!42;UBERON:0001981!4.84e-14!60;UBERON:0007500!4.84e-14!60;UBERON:0004537!4.84e-14!60;UBERON:0006965!4.84e-14!60;UBERON:0000490!1.67e-12!138;UBERON:0002204!5.01e-11!167;UBERON:0005256!1.52e-10!143;UBERON:0004573!2.84e-10!33;UBERON:0004571!2.84e-10!33;UBERON:0002384!5.90e-10!375;UBERON:0003914!7.21e-10!118;UBERON:0000926!2.78e-08!448;UBERON:0004120!2.78e-08!448;UBERON:0006603!2.78e-08!448;UBERON:0000468!1.23e-07!659;UBERON:0002199!6.01e-07!45;UBERON:0002416!6.01e-07!45;UBERON:0002100!6.32e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.86e-14;42!UBERON:0003509;8.86e-14;42!UBERON:0004572;8.86e-14;42!UBERON:0004573;8.91e-11;33!UBERON:0004571;8.91e-11;33!UBERON:0007500;1.87e-10;56!UBERON:0001981;1.87e-10;56!UBERON:0004537;1.87e-10;56!UBERON:0000055;2.84e-10;65!UBERON:0004457;5.76e-08;9!UBERON:0000042;5.76e-08;9!UBERON:0000947;6.81e-08;21!UBERON:0010191;6.81e-08;21!UBERON:0002385;8.32e-08;31!UBERON:0001015;8.32e-08;31!UBERON:0000383;8.32e-08;31!UBERON:0002049;1.53e-07;75!UBERON:0007798;1.53e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.15e-18,42;UBERON:0003509,2.15e-18,42;UBERON:0004572,2.15e-18,42;UBERON:0001134,8.90e-18,62;UBERON:0002036,8.90e-18,62;UBERON:0003082,8.90e-18,62;UBERON:0004872,1.98e-17,83;UBERON:0000055,2.93e-17,68;UBERON:0002385,6.93e-17,64;UBERON:0001015,6.93e-17,64;UBERON:0000383,6.93e-17,64;UBERON:0007524,1.02e-16,73;UBERON:0002049,1.19e-16,78;UBERON:0007798,1.19e-16,78;UBERON:0002329,2.26e-16,71;UBERON:0003059,2.26e-16,71;UBERON:0007282,2.26e-16,71;UBERON:0004290,2.26e-16,71;UBERON:0009618,2.26e-16,71;UBERON:0004535,3.06e-16,109;UBERON:0003077,5.45e-16,72;UBERON:0007285,5.45e-16,72;UBERON:0001009,1.99e-15,112;UBERON:0007503,6.64e-15,78;UBERON:0007500,8.68e-15,59;UBERON:0001981,8.68e-15,59;UBERON:0004537,8.68e-15,59;UBERON:0006965,8.68e-15,59;UBERON:0000486,1.05e-14,83;UBERON:0000926,3.53e-14,315;UBERON:0004120,3.53e-14,315;UBERON:0006603,3.53e-14,315;UBERON:0000490,8.21e-12,148;UBERON:0004573,1.55e-11,33;UBERON:0004571,1.55e-11,33;UBERON:0002204,9.79e-10,167;UBERON:0003914,1.82e-09,117;UBERON:0005256,2.66e-08,122;UBERON:0000947,8.77e-08,21;UBERON:0010191,8.77e-08,21;UBERON:0000948,2.91e-07,24;UBERON:0005498,2.91e-07,24;UBERON:0004140,2.91e-07,24;UBERON:0009881,2.91e-07,24;UBERON:0004141,2.91e-07,24;UBERON:0003084,2.91e-07,24;UBERON:0007005,2.91e-07,24;UBERON:0004139,2.91e-07,24;UBERON:0004291,2.91e-07,24;UBERON:0003104,3.37e-07,160;UBERON:0009142,3.37e-07,160 | |||
|phase1_expression=5.81370813665781,6.20891519283851,3.94672331468719,3.00219895059391,3.5756887554183,12.2127393374052,2.53299878168311,2.52687949370732,0.522371256399677,0,0,0,0,0.618831764800233,0.994192127183747,2.01697543935533,0,1.46062018077475,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00272223735071,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0,0.929119112685311,0.863077176966451,0.256160706529101,0.236482229888585,1.72372840368309,0,6.77132432971709,0,0.272906150057846,0.224723484445085,0.918251677112708,0,1.27867425159808,0,0,0,2.32167390902867,1.13477044938228,0.622822248995575,0,0,0,3.02699751316684,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.15076305659177,4.69870898099936,2.50668955317945,0.724232594804119,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0,1.13061588384802,2.93649605346934,2.47606237746061,1.67195973229448,1.8089173141853,0.35576626268671,0,1.20848795132744,0,0.24406205754817,4.41195696415042,2.43042584364528,0.17859945656816,1.12264686313085,0.225222960966644,1.53316637465883,0,0,0,0,0,9.44246708221105,2.78587125662075,1.32409180813219,6.02356903572509,1.06400514659507,1.12135520028461,1.06748995729705,0.74000264525148,0.622422070799533,7.54379763590253,6.37501422142489,0.302714855289863,2.30470369792,1.17160715916898,0,0.570471821544449,0.448346041655403,1.29177948508141,3.0755859429945,0.842704840213491,0.61246251376468,1.84251475967652,0.103325781175765,0,1.7308685049499,0,3.59309070908119,0.505008341862199,0,0,0.438977620880838,2.14541457059314,0.751190294532984,4.53728732640084,0.358779271377724,2.56268866582281,5.93409323246773,1.20036438433761,0.721367704669072,2.57640540045629,1.67505170698431,0.168776332241266,0.292311015483596,1.7670364197088,3.03764665519588,0.646584227275248,0.710019185033229,0.403008392910561,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,25.5402360417588,15.8813485967309,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,1.62904152655162,2.07986957055916,2.88662684050547,0,0.117408694235822,1.01056513432752,4.62985512576611,8.37118269832232,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,1.03417372606222,0,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0.542621605391443,0.823240336780769,1.95441710576241,0,3.95975936466715,0.602878754119172,0,0.099972991182057,0,0,0,0.479249710983165,2.29723871668228,0,5.64647096003559,4.31500277355805,0.895304816199478,0,0,0,0,0,0,1.54657762555539,0,1.27587750330633,0,0,0,1.47229790062968,2.50085260529839,10.8506009479894,0.207970861530807,0.892144943985809,0.473107245101804,0,2.10662269809403,0,0,0,0.553107505625109,2.43274120510632,0,0,0,0.215714200818617,0.106727557803444,0,0,0,6.20269519546942,1.07423381301644,3.36792113319688,10.5074102389675,0,1.93024705372329,1.48418066444991,0.462629081407967,1.06537035187876,0.410635780069046,1.03850885836724,3.7187321107187,0,0,0,1.83703117063371,3.82391452814106,0.262248829918848,0,0.0770153371044148,0,0,0,0,1.70093705276516,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.769350375349168,0.328014645699706,0.650756789328606,0,0,0,0,0,6.42735719376638,2.03008508413456,5.5457502161272,6.29365066377131,3.1702411671442,3.86712881525785,5.22060098091223,0.852266274161009,0.801288320820636,0,0,0,0,0,1.88887408098384,0,4.00443654228915,1.06461206063404,0,0.37064843820784,1.71749864090389,0.372158369359667,0.316379424718726,1.90630193923825,1.02359116524534,2.56763392820352,7.95508119814842,3.13979456079692,1.61885211824983,3.0199073270966,1.53156123049392,1.61745985258653,0,3.37006764991185,0,12.4293879711955,0,1.09199929126389,0.848432591722276,5.65040583101214,2.2054613741845,0.66343897524122,0.876901770507525,0,0.655894752046633,1.62328301570163,1.54911749049875,5.35221644811259,0.860468113224309,3.04572027140676,0,1.06428319221179,6.96655196482292,44.1255156566269,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0.123084805461069,1.24415835064723,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,2.3526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| ||
|short_description=p@chr3:157160656..157160698,- | |||
}} | }} |
Latest revision as of 17:34, 29 July 2015
Short description: | p@chr3:157160656..157160698, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:157160656..157160698, - |
Coexpression cluster: | C549_mesenchymal_Fibroblast_Synoviocyte_Hair_Smooth_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.34e-20 | 427 |
muscle precursor cell | 9.35e-20 | 58 |
myoblast | 9.35e-20 | 58 |
multi-potent skeletal muscle stem cell | 9.35e-20 | 58 |
somatic stem cell | 1.83e-19 | 433 |
stem cell | 1.64e-18 | 441 |
muscle cell | 3.10e-18 | 55 |
mesodermal cell | 5.81e-18 | 121 |
electrically responsive cell | 1.00e-17 | 61 |
electrically active cell | 1.00e-17 | 61 |
fibroblast | 2.61e-17 | 76 |
smooth muscle cell | 6.48e-13 | 43 |
smooth muscle myoblast | 6.48e-13 | 43 |
vascular associated smooth muscle cell | 9.14e-10 | 32 |
cardiocyte | 1.53e-08 | 16 |
preadipocyte | 1.02e-07 | 12 |
endothelial cell of vascular tree | 1.22e-07 | 24 |
fat cell | 9.00e-07 | 15 |