FFCP PHASE1:Hg19::chr3:157160714..157160730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:157160714..157160730,+ | |||
|coexpression_cluster_id=C549 | |||
|description=CAGE_peak_at_chr3:157160714..157160730,+ | |description=CAGE_peak_at_chr3:157160714..157160730,+ | ||
|id=chr3:157160714..157160730,+ | |id=chr3:157160714..157160730,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.04e-32!180;CL:0000048!4.79e-31!430;CL:0000723!1.04e-29!436;CL:0000034!5.45e-28!444;CL:0000057!1.44e-27!75;CL:0002371!4.26e-23!591;CL:0000144!4.53e-22!625;CL:0000548!5.76e-18!679;CL:0000004!5.76e-18!679;CL:0000255!5.76e-18!679;CL:0000012!1.53e-17!682;CL:0002320!1.25e-16!365;CL:0000134!1.87e-15!358;CL:0000222!9.64e-14!119;CL:0000219!5.39e-13!390;CL:0000003!1.14e-12!722;CL:0000680!8.96e-12!57;CL:0000056!8.96e-12!57;CL:0000355!8.96e-12!57;CL:0000187!4.59e-11!54;CL:0002620!1.03e-10!23;CL:0000393!3.02e-10!60;CL:0000211!3.02e-10!60;CL:0002057!1.75e-09!42;CL:0000183!3.84e-09!59;CL:0002334!1.34e-08!12;CL:0000860!3.08e-08!45;CL:0002139!1.62e-07!24;CL:0000192!1.71e-07!42;CL:0000514!1.71e-07!42;CL:0000136!4.07e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.04e-32!180;CL:0000048!4.79e-31!430;CL:0000723!1.04e-29!436;CL:0000034!5.45e-28!444;CL:0000057!1.44e-27!75;CL:0002371!4.26e-23!591;CL:0000144!4.53e-22!625;CL:0000548!5.76e-18!679;CL:0000004!5.76e-18!679;CL:0000255!5.76e-18!679;CL:0000012!1.53e-17!682;CL:0002320!1.25e-16!365;CL:0000134!1.87e-15!358;CL:0000222!9.64e-14!119;CL:0000219!5.39e-13!390;CL:0000003!1.14e-12!722;CL:0000680!8.96e-12!57;CL:0000056!8.96e-12!57;CL:0000355!8.96e-12!57;CL:0000187!4.59e-11!54;CL:0002620!1.03e-10!23;CL:0000393!3.02e-10!60;CL:0000211!3.02e-10!60;CL:0002057!1.75e-09!42;CL:0000183!3.84e-09!59;CL:0002334!1.34e-08!12;CL:0000860!3.08e-08!45;CL:0002139!1.62e-07!24;CL:0000192!1.71e-07!42;CL:0000514!1.71e-07!42;CL:0000136!4.07e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.76e-08;33!CL:0002057;4.76e-08;33!CL:0000569;7.42e-08;4!CL:1000306;3.16e-07;4!CL:0002547;3.16e-07;4!CL:0002334;3.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.04e-23,427;CL:0000723,5.69e-23,433;CL:0000034,5.08e-22,441;CL:0000134,1.45e-13,354;CL:0002320,2.19e-13,361;CL:0000057,3.05e-12,76;CL:0000219,5.29e-11,386;CL:0000136,2.92e-08,15;CL:0000569,6.25e-08,4;CL:0000011,6.25e-08,4;CL:0002334,2.35e-07,12;CL:0000680,2.41e-07,58;CL:0000056,2.41e-07,58;CL:0000355,2.41e-07,58;CL:1000306,2.64e-07,4;CL:0002547,2.64e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;7.42e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!2.06e-07!14 | |ontology_enrichment_disease=DOID:2394!2.06e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.33e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.35e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.74e-17!375;UBERON:0002204!5.91e-16!167;UBERON:0000914!2.66e-14!83;UBERON:0002329!2.66e-14!83;UBERON:0003077!2.66e-14!83;UBERON:0003059!2.66e-14!83;UBERON:0007282!2.66e-14!83;UBERON:0009618!2.66e-14!83;UBERON:0007285!2.66e-14!83;UBERON:0004290!2.18e-12!70;UBERON:0002049!3.33e-11!79;UBERON:0007798!3.33e-11!79;UBERON:0001134!9.98e-11!61;UBERON:0002036!9.98e-11!61;UBERON:0003082!9.98e-11!61;UBERON:0000486!1.01e-10!82;UBERON:0002385!5.45e-10!63;UBERON:0001015!5.45e-10!63;UBERON:0000383!5.45e-10!63;UBERON:0004535!9.34e-10!110;UBERON:0000055!2.00e-09!69;UBERON:0001009!4.69e-09!113;UBERON:0000926!1.43e-08!448;UBERON:0004120!1.43e-08!448;UBERON:0006603!1.43e-08!448;UBERON:0004872!1.67e-08!84;UBERON:0001637!3.88e-08!42;UBERON:0003509!3.88e-08!42;UBERON:0004572!3.88e-08!42;UBERON:0002199!1.64e-07!45;UBERON:0002416!1.64e-07!45;UBERON:0001981!2.88e-07!60;UBERON:0007500!2.88e-07!60;UBERON:0004537!2.88e-07!60;UBERON:0006965!2.88e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.84e-10;9!UBERON:0000042;7.84e-10;9!UBERON:0003688;6.76e-08;6!UBERON:0002358;6.76e-08;6!UBERON:0003684;6.76e-08;6!UBERON:0001178;6.76e-08;6!UBERON:0004797;3.16e-07;4!UBERON:0000415;3.16e-07;4!UBERON:0007240;3.16e-07;4!UBERON:0005742;3.16e-07;4!UBERON:0005734;3.16e-07;4!UBERON:0004664;3.16e-07;4!UBERON:0004663;3.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.56e-14,371;UBERON:0000926,7.40e-13,315;UBERON:0004120,7.40e-13,315;UBERON:0006603,7.40e-13,315;UBERON:0002204,1.96e-12,167;UBERON:0003688,6.98e-08,6;UBERON:0002358,6.98e-08,6;UBERON:0003684,6.98e-08,6;UBERON:0001178,6.98e-08,6;UBERON:0000415,2.64e-07,4;UBERON:0007240,2.64e-07,4;UBERON:0005742,2.64e-07,4;UBERON:0005734,2.64e-07,4;UBERON:0004664,2.64e-07,4;UBERON:0004663,2.64e-07,4;UBERON:0004457,5.51e-07,12;UBERON:0000042,5.51e-07,12 | |||
|phase1_expression=7.26713517082227,13.7024335290229,4.79244973926302,6.00439790118782,4.02264984984559,5.23403114460221,2.53299878168311,0.631719873426831,0,0,0,0,0,0.618831764800233,0.331397375727916,2.01697543935533,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0.411167888021826,1.23882548358041,1.1507695692886,1.7931249457037,0.709446689665756,2.41321976515633,1.93645405075148,4.06279459783025,0.376484679085209,0.272906150057846,0.449446968890169,0.612167784741805,2.88836124368484,1.91801137739712,0.329851300186716,0.199463657621632,0,6.67481248845743,3.97169657283798,5.60540024096017,0,2.60741459210101,1.08594422352558,7.87019353423379,2.94622108790052,7.27863491114034,0,0,0.209658645508376,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,1.0843174571537,0,1.15877215168659,0,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,1.37559020970034,0.417989933073621,1.55050055501597,1.06729878806013,0.33472061276467,0,0.760272105718513,0.976248230192678,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.563057402416611,0,0,0.183201743930407,0,0,0,7.9515512271251,3.41902381494365,1.85372853138506,16.0628507619336,2.12801029319014,0,0,0.49333509683432,0.933633106199299,2.42479209725439,1.9615428373615,0.454072282934794,0.576175924479999,1.40592859100278,0.312160076830321,0.570471821544449,0.298897361103602,0.704606991862589,1.13311061057692,0.421352420106746,0.204154171254893,0.737005903870608,0.103325781175765,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,1.75591048352335,1.83892677479412,1.20190447125277,1.36118619792025,1.4351170855109,1.70845911054854,5.93409323246773,0.900273288253207,0.618315175430633,4.63752972082133,1.67505170698431,0.506328996723799,0.194874010322397,0.252433774244115,1.74894807420369,0.969876340912871,1.06502877754984,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,11.1448302727675,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,2.93227474779292,1.03993478527958,0,0,0.117408694235822,0.577465791044295,4.1668696131895,4.37584550139576,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,1.42198887333556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,1.58390374586686,0,0,0.399891964728228,0,0,0,0,0,0,4.1986578933598,1.64381058040307,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0.414415513436035,0.36807447515742,1.00034104211935,0.813795071099207,0,0,0.157702415033935,0,1.50473049863859,2.27407504055985,2.0694614258501,0,0.184369168541703,0.955719759148911,0,0,0,0,0,0,0,0,3.72161711728165,1.68808170616869,1.96462066103151,4.48487022394953,0.511707249066704,9.49038134747284,1.48418066444991,0.771048469013278,1.42049380250502,0.164254312027618,1.55776328755086,0.581051892299796,0,0,0,1.60740227430449,1.63882051206045,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,3.21367859688319,0.290012154876366,2.15668063960502,1.99554777143968,0.689182862422653,2.14840489736547,2.46528379654188,1.10794615640931,0.0890320356467374,0,0,0,0,0,3.46293581513704,0,0.616067160352178,0.532306030317022,0,0,2.14687330112987,0.372158369359667,0.632758849437452,0.953150969619124,0.255897791311334,2.1396949401696,1.90921948755562,2.35484592059769,0.719489830333259,3.84351841630477,2.00281083987667,0,0,0,0.48763373908959,5.36169677188826,0,0.136499911407986,1.83827061539827,0,0,0,1.75380354101505,0.578775534266688,0,0.202910376962704,1.54911749049875,0.845086807596724,0.286822704408103,1.17898849215745,0,0.709522128141196,8.65541304720423,20.4162833635139,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,2.79935628895627,0.0898683511473268,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0.447764408660622,6.07654605602784,7.21247619953397,2.46223906857616,9.55958026659785,1.77962244319307,23.3416869764862,20.5674056318005,2.33155800874171,2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| ||
|short_description=p@chr3:157160714..157160730,+ | |short_description=p@chr3:157160714..157160730,+ | ||
}} | }} |
Latest revision as of 17:34, 29 July 2015
Short description: | p@chr3:157160714..157160730, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:157160714..157160730, + |
Coexpression cluster: | C549_mesenchymal_Fibroblast_Synoviocyte_Hair_Smooth_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.04e-23 | 427 |
somatic stem cell | 5.69e-23 | 433 |
stem cell | 5.08e-22 | 441 |
mesenchymal cell | 1.45e-13 | 354 |
connective tissue cell | 2.19e-13 | 361 |
fibroblast | 3.05e-12 | 76 |
motile cell | 5.29e-11 | 386 |
fat cell | 2.92e-08 | 15 |
cardiac mesenchymal cell | 6.25e-08 | 4 |
migratory trunk neural crest cell | 6.25e-08 | 4 |
preadipocyte | 2.35e-07 | 12 |
muscle precursor cell | 2.41e-07 | 58 |
myoblast | 2.41e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.41e-07 | 58 |
fibroblast of tunica adventitia of artery | 2.64e-07 | 4 |
fibroblast of the aortic adventitia | 2.64e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.56e-14 | 371 |
mesoderm | 7.40e-13 | 315 |
mesoderm-derived structure | 7.40e-13 | 315 |
presumptive mesoderm | 7.40e-13 | 315 |
musculoskeletal system | 1.96e-12 | 167 |
omentum | 6.98e-08 | 6 |
peritoneum | 6.98e-08 | 6 |
abdominal cavity | 6.98e-08 | 6 |
visceral peritoneum | 6.98e-08 | 6 |
artery wall | 2.64e-07 | 4 |
tunica adventitia of artery | 2.64e-07 | 4 |
adventitia | 2.64e-07 | 4 |
tunica adventitia of blood vessel | 2.64e-07 | 4 |
aorta tunica adventitia | 2.64e-07 | 4 |
aorta wall | 2.64e-07 | 4 |
cavity lining | 5.51e-07 | 12 |
serous membrane | 5.51e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.35e-08 | 14 |