FFCP PHASE1:Hg19::chr3:170150614..170150632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170150614..170150632,+ | |||
|coexpression_cluster_id=C635 | |coexpression_cluster_id=C635 | ||
|description=CAGE_peak_at_chr3:170150614..170150632,+ | |description=CAGE_peak_at_chr3:170150614..170150632,+ | ||
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|ontology_enrichment_celltype=CL:0000222!3.64e-22!119;CL:0000055!4.86e-21!180;CL:0000183!5.17e-16!59;CL:0000680!5.38e-15!57;CL:0000056!5.38e-15!57;CL:0000355!5.38e-15!57;CL:0000057!1.15e-14!75;CL:0000187!2.69e-14!54;CL:0000393!2.94e-13!60;CL:0000211!2.94e-13!60;CL:0000192!5.34e-10!42;CL:0000514!5.34e-10!42;CL:0000220!7.42e-09!246;CL:0002321!1.52e-08!248;CL:0000213!6.07e-08!57;CL:0000215!6.07e-08!57 | |ontology_enrichment_celltype=CL:0000222!3.64e-22!119;CL:0000055!4.86e-21!180;CL:0000183!5.17e-16!59;CL:0000680!5.38e-15!57;CL:0000056!5.38e-15!57;CL:0000355!5.38e-15!57;CL:0000057!1.15e-14!75;CL:0000187!2.69e-14!54;CL:0000393!2.94e-13!60;CL:0000211!2.94e-13!60;CL:0000192!5.34e-10!42;CL:0000514!5.34e-10!42;CL:0000220!7.42e-09!246;CL:0002321!1.52e-08!248;CL:0000213!6.07e-08!57;CL:0000215!6.07e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0000187;4.75e-07;55 | |ontology_enrichment_celltype_v019=CL:0000187;4.75e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.86e-15,121;CL:0000187,1.08e-10,55;CL:0000680,1.53e-10,58;CL:0000056,1.53e-10,58;CL:0000355,1.53e-10,58;CL:0000057,1.52e-09,76;CL:0000393,7.72e-09,61;CL:0000211,7.72e-09,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;7.65e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;7.65e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.58e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0011135;1.44e-07;5!UBERON:0002216;1.44e-07;5!UBERON:0011134;1.44e-07;5!UBERON:0002209;1.44e-07;5!UBERON:0002213;1.44e-07;5!UBERON:0007844;1.44e-07;5!UBERON:0011138;1.44e-07;5!UBERON:0001130;1.44e-07;5!UBERON:0001066;1.44e-07;5!UBERON:0001468;1.44e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0011135;1.44e-07;5!UBERON:0002216;1.44e-07;5!UBERON:0011134;1.44e-07;5!UBERON:0002209;1.44e-07;5!UBERON:0002213;1.44e-07;5!UBERON:0007844;1.44e-07;5!UBERON:0011138;1.44e-07;5!UBERON:0001130;1.44e-07;5!UBERON:0001066;1.44e-07;5!UBERON:0001468;1.44e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.23e-12,78;UBERON:0003077,2.17e-11,72;UBERON:0007285,2.17e-11,72;UBERON:0007524,4.29e-11,73;UBERON:0002329,5.96e-11,71;UBERON:0003059,5.96e-11,71;UBERON:0007282,5.96e-11,71;UBERON:0004290,5.96e-11,71;UBERON:0009618,5.96e-11,71;UBERON:0000486,1.31e-09,83;UBERON:0005256,1.50e-09,122;UBERON:0001134,2.56e-09,62;UBERON:0002036,2.56e-09,62;UBERON:0003082,2.56e-09,62;UBERON:0002385,9.04e-09,64;UBERON:0001015,9.04e-09,64;UBERON:0000383,9.04e-09,64;UBERON:0000119,1.59e-08,309;UBERON:0000483,6.15e-08,306;UBERON:0003104,6.56e-08,160;UBERON:0009142,6.56e-08,160;UBERON:0011135,1.53e-07,5;UBERON:0002216,1.53e-07,5;UBERON:0011134,1.53e-07,5;UBERON:0002209,1.53e-07,5;UBERON:0002213,1.53e-07,5;UBERON:0005856,1.53e-07,5;UBERON:0005866,1.53e-07,5;UBERON:0005863,1.53e-07,5;UBERON:0007844,1.53e-07,5;UBERON:0011138,1.53e-07,5;UBERON:0001130,1.53e-07,5;UBERON:0001066,1.53e-07,5;UBERON:0001468,1.53e-07,5;UBERON:0000490,4.03e-07,148 | |||
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| ||
|short_description=p@chr3:170150614..170150632,+ | |short_description=p@chr3:170150614..170150632,+ | ||
}} | }} |
Latest revision as of 18:10, 29 July 2015
Short description: | p@chr3:170150614..170150632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170150614..170150632, + |
Coexpression cluster: | C635_Fibroblast_Pericytes_Nucleus_Preadipocyte_Smooth_mesothelioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.86e-15 | 121 |
muscle cell | 1.08e-10 | 55 |
muscle precursor cell | 1.53e-10 | 58 |
myoblast | 1.53e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-10 | 58 |
fibroblast | 1.52e-09 | 76 |
electrically responsive cell | 7.72e-09 | 61 |
electrically active cell | 7.72e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.58e-08 | 14 |