FFCP PHASE1:Hg19::chr3:185136568..185136602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000422486_5end | |||
|cluster_id=chr3:185136568..185136602,- | |||
|coexpression_cluster_id=C1162 | |||
|description=CAGE_peak_1_at_ENST00000422486_5end | |||
|id=chr3:185136568..185136602,- | |||
|ontology_enrichment_celltype=CL:0000012!2.59e-43!682;CL:0000548!3.03e-43!679;CL:0000004!3.03e-43!679;CL:0000255!3.03e-43!679;CL:0000003!4.30e-28!722;CL:0000144!9.05e-27!625;CL:0002321!8.53e-26!248;CL:0000220!2.50e-25!246;CL:0000066!1.20e-18!254;CL:0000055!1.79e-18!180;CL:0002371!1.81e-18!591;CL:0000222!1.29e-15!119;CL:0000063!6.05e-15!578;CL:0000393!6.66e-12!60;CL:0000211!6.66e-12!60;CL:0000076!1.53e-11!62;CL:0000680!3.15e-11!57;CL:0000056!3.15e-11!57;CL:0000355!3.15e-11!57;CL:0000187!4.70e-11!54;CL:0000359!5.89e-10!32;CL:0000192!1.86e-09!42;CL:0000514!1.86e-09!42;CL:0000183!3.23e-09!59;CL:0000071!3.31e-08!18;CL:0002546!3.31e-08!18;CL:0002139!3.49e-08!24;CL:0000213!5.65e-07!57;CL:0000215!5.65e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.62e-09;32!CL:0000071;3.30e-08;18!CL:0002139;3.39e-08;24!CL:0000192;8.28e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.92e-26,250;CL:0000066,7.75e-19,253;CL:0000222,1.62e-15,121;CL:0000393,1.52e-11,61;CL:0000211,1.52e-11,61;CL:0000076,1.80e-11,63;CL:0000680,7.14e-11,58;CL:0000056,7.14e-11,58;CL:0000355,7.14e-11,58;CL:0000187,1.09e-10,55;CL:0000359,5.89e-10,32;CL:0000192,4.48e-09,43;CL:0000514,4.48e-09,43;CL:0000071,3.31e-08,18;CL:0002546,3.31e-08,18;CL:0002139,3.49e-08,24;CL:0000213,3.96e-07,58;CL:0000215,3.96e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.30e-08;18!CL:0000514;8.28e-07;43 | |||
|ontology_enrichment_disease=DOID:14566!6.62e-23!239;DOID:162!5.70e-22!235;DOID:2531!1.53e-10!51;DOID:0060083!1.53e-10!51;DOID:0050686!1.71e-10!137;DOID:0050687!1.17e-08!143;DOID:1240!5.75e-08!39;DOID:305!7.66e-08!106;DOID:8692!2.70e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.81e-07;31!DOID:1240;8.10e-07;39!DOID:2531;9.92e-07;51!DOID:0060083;9.92e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.62e-23,239;DOID:162,5.70e-22,235;DOID:2531,1.53e-10,51;DOID:0060083,1.53e-10,51;DOID:0050686,1.71e-10,137;DOID:0050687,1.17e-08,143;DOID:1240,5.75e-08,39;DOID:305,7.66e-08,106;DOID:8692,2.70e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.17e-14!42;UBERON:0003509!3.17e-14!42;UBERON:0004572!3.17e-14!42;UBERON:0000490!8.22e-14!138;UBERON:0000055!3.32e-13!69;UBERON:0001981!3.66e-13!60;UBERON:0007500!3.66e-13!60;UBERON:0004537!3.66e-13!60;UBERON:0006965!3.66e-13!60;UBERON:0002049!5.11e-13!79;UBERON:0007798!5.11e-13!79;UBERON:0004290!3.44e-12!70;UBERON:0000914!7.65e-12!83;UBERON:0002329!7.65e-12!83;UBERON:0003077!7.65e-12!83;UBERON:0003059!7.65e-12!83;UBERON:0007282!7.65e-12!83;UBERON:0009618!7.65e-12!83;UBERON:0007285!7.65e-12!83;UBERON:0004872!1.35e-11!84;UBERON:0000486!1.78e-11!82;UBERON:0004573!3.81e-10!33;UBERON:0004571!3.81e-10!33;UBERON:0001134!9.91e-10!61;UBERON:0002036!9.91e-10!61;UBERON:0003082!9.91e-10!61;UBERON:0003914!6.36e-09!118;UBERON:0004535!7.37e-09!110;UBERON:0003104!1.32e-08!238;UBERON:0009142!1.32e-08!238;UBERON:0002385!1.36e-08!63;UBERON:0001015!1.36e-08!63;UBERON:0000383!1.36e-08!63;UBERON:0000487!2.35e-08!22;UBERON:0001986!3.31e-08!18;UBERON:0004638!3.31e-08!18;UBERON:0004852!3.31e-08!18;UBERON:0001009!7.40e-08!113;UBERON:0006914!7.95e-08!25;UBERON:0002100!1.84e-07!216;UBERON:0005256!4.99e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.21e-10;42!UBERON:0003509;1.21e-10;42!UBERON:0004572;1.21e-10;42!UBERON:0007500;8.85e-10;56!UBERON:0001981;8.85e-10;56!UBERON:0004537;8.85e-10;56!UBERON:0004573;3.05e-09;33!UBERON:0004571;3.05e-09;33!UBERON:0000487;2.31e-08;22!UBERON:0000490;3.16e-08;33!UBERON:0004638;3.30e-08;18!UBERON:0001986;3.30e-08;18!UBERON:0004852;3.30e-08;18!UBERON:0000055;4.28e-08;65!UBERON:0006914;7.51e-08;25!UBERON:0002049;3.09e-07;75!UBERON:0007798;3.09e-07;75 | |||
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| |||
|short_description=p1@ENST00000422486 | |||
}} |
Latest revision as of 19:01, 29 July 2015
Short description: | p1@ENST00000422486 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000422486_5end |
Coexpression cluster: | C1162_embryonic_iPS_Keratinocyte_giant_teratocarcinoma_acute_chronic |
Association with transcript: | -2bp_to_ENST00000422486_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.92e-26 | 250 |
epithelial cell | 7.75e-19 | 253 |
mesodermal cell | 1.62e-15 | 121 |
electrically responsive cell | 1.52e-11 | 61 |
electrically active cell | 1.52e-11 | 61 |
squamous epithelial cell | 1.80e-11 | 63 |
muscle precursor cell | 7.14e-11 | 58 |
myoblast | 7.14e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.14e-11 | 58 |
muscle cell | 1.09e-10 | 55 |
vascular associated smooth muscle cell | 5.89e-10 | 32 |
smooth muscle cell | 4.48e-09 | 43 |
smooth muscle myoblast | 4.48e-09 | 43 |
blood vessel endothelial cell | 3.31e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.31e-08 | 18 |
endothelial cell of vascular tree | 3.49e-08 | 24 |
lining cell | 3.96e-07 | 58 |
barrier cell | 3.96e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.62e-23 | 239 |
cancer | 5.70e-22 | 235 |
hematologic cancer | 1.53e-10 | 51 |
immune system cancer | 1.53e-10 | 51 |
organ system cancer | 1.71e-10 | 137 |
cell type cancer | 1.17e-08 | 143 |
leukemia | 5.75e-08 | 39 |
carcinoma | 7.66e-08 | 106 |
myeloid leukemia | 2.70e-07 | 31 |