FFCP PHASE1:Hg19::chr3:47205460..47205492,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=29072 | |EntrezGene=entrezgene:29072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18420 | |HGNC=HGNC:18420 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F2Z317,F5H340,Q9BYW2 | |UniProt=uniprot:F2Z317,uniprot:F5H340,uniprot:Q9BYW2 | ||
|association_with_transcript=0bp_to_ENST00000451092,ENST00000543224,NM_014159,uc003cqs.2,uc003cqv.2_5end | |association_with_transcript=0bp_to_ENST00000451092,ENST00000543224,NM_014159,uc003cqs.2,uc003cqv.2_5end | ||
|cluster_id=chr3:47205460..47205492,- | |||
|description=CAGE_peak_4_at_SETD2_5end | |description=CAGE_peak_4_at_SETD2_5end | ||
|id=chr3:47205460..47205492,- | |id=chr3:47205460..47205492,- |
Revision as of 21:31, 29 July 2015
Short description: | p4@SETD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SETD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000451092, ENST00000543224, NM_014159, uc003cqs.2, uc003cqv.2_5end |
EntrezGene: | 29072 |
HGNC: | 18420 |
UniProt: | F2Z317F5H340Q9BYW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SETD2 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 6.37e-14 | 89 |
central nervous system | 7.77e-13 | 81 |
brain | 4.48e-12 | 68 |
future brain | 4.48e-12 | 68 |
organ system subdivision | 4.72e-11 | 223 |
regional part of nervous system | 6.08e-09 | 53 |
regional part of brain | 6.08e-09 | 53 |
neural tube | 7.22e-09 | 56 |
neural rod | 7.22e-09 | 56 |
future spinal cord | 7.22e-09 | 56 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.46e-07 | 22 |
germ cell cancer | 1.46e-07 | 22 |
Showing 1 to 2 of 2 entries