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FFCP PHASE1:Hg19::chr3:47205460..47205492,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=29072
|EntrezGene=entrezgene:29072
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=18420
|HGNC=HGNC:18420
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=F2Z317,F5H340,Q9BYW2
|UniProt=uniprot:F2Z317,uniprot:F5H340,uniprot:Q9BYW2
|association_with_transcript=0bp_to_ENST00000451092,ENST00000543224,NM_014159,uc003cqs.2,uc003cqv.2_5end
|association_with_transcript=0bp_to_ENST00000451092,ENST00000543224,NM_014159,uc003cqs.2,uc003cqv.2_5end
|cluster_id=chr3:47205460..47205492,-
|description=CAGE_peak_4_at_SETD2_5end
|description=CAGE_peak_4_at_SETD2_5end
|id=chr3:47205460..47205492,-
|id=chr3:47205460..47205492,-

Revision as of 21:31, 29 July 2015

Short description:p4@SETD2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_SETD2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000451092, ENST00000543224, NM_014159, uc003cqs.2, uc003cqv.2_5end
EntrezGene:29072
HGNC: 18420
UniProt: F2Z317F5H340Q9BYW2
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data