FFCP PHASE1:Hg19::chr3:4793475..4793490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:4793475..4793490,+ | |||
|coexpression_cluster_id=C656 | |coexpression_cluster_id=C656 | ||
|description=CAGE_peak_at_chr3:4793475..4793490,+ | |description=CAGE_peak_at_chr3:4793475..4793490,+ | ||
|id=chr3:4793475..4793490,+ | |id=chr3:4793475..4793490,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.81e-28!42;CL:0000860!1.26e-25!45;CL:0000557!6.41e-22!71;CL:0000766!2.35e-21!76;CL:0002009!1.04e-19!65;CL:0000839!6.43e-19!70;CL:0000738!7.18e-18!140;CL:0002194!3.73e-17!63;CL:0000576!3.73e-17!63;CL:0000040!3.73e-17!63;CL:0000559!3.73e-17!63;CL:0000763!1.31e-14!112;CL:0000049!1.31e-14!112;CL:0000037!4.96e-13!172;CL:0000566!4.96e-13!172;CL:0002031!1.13e-12!124;CL:0000988!1.18e-11!182;CL:0002087!1.34e-11!119;CL:0000134!8.19e-11!358;CL:0002320!2.83e-10!365;CL:0002032!5.91e-10!165;CL:0000837!5.91e-10!165;CL:0000219!2.10e-08!390;CL:0000034!3.33e-08!444;CL:0000723!1.35e-07!436;CL:0000767!1.47e-07!3;CL:0000048!1.65e-07!430;CL:0000842!3.50e-07!3;CL:0000063!3.51e-07!578;CL:0000784!4.67e-07!3 | |ontology_enrichment_celltype=CL:0002057!4.81e-28!42;CL:0000860!1.26e-25!45;CL:0000557!6.41e-22!71;CL:0000766!2.35e-21!76;CL:0002009!1.04e-19!65;CL:0000839!6.43e-19!70;CL:0000738!7.18e-18!140;CL:0002194!3.73e-17!63;CL:0000576!3.73e-17!63;CL:0000040!3.73e-17!63;CL:0000559!3.73e-17!63;CL:0000763!1.31e-14!112;CL:0000049!1.31e-14!112;CL:0000037!4.96e-13!172;CL:0000566!4.96e-13!172;CL:0002031!1.13e-12!124;CL:0000988!1.18e-11!182;CL:0002087!1.34e-11!119;CL:0000134!8.19e-11!358;CL:0002320!2.83e-10!365;CL:0002032!5.91e-10!165;CL:0000837!5.91e-10!165;CL:0000219!2.10e-08!390;CL:0000034!3.33e-08!444;CL:0000723!1.35e-07!436;CL:0000767!1.47e-07!3;CL:0000048!1.65e-07!430;CL:0000842!3.50e-07!3;CL:0000063!3.51e-07!578;CL:0000784!4.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-30;33!CL:0002057;3.19e-30;33!CL:0000473;1.57e-20;39!CL:0000234;1.57e-20;39!CL:0000576;2.46e-19;48!CL:0000766;4.52e-18;69!CL:0001014;1.11e-17;2!CL:0001016;1.11e-17;2!CL:0002393;3.62e-13;6!CL:0002397;3.62e-13;6!CL:0000226;9.83e-12;3!CL:0000842;9.83e-12;3!CL:0000767;1.51e-11;3!CL:0002087;5.45e-10;104!CL:0000763;3.72e-08;100!CL:0000453;1.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.05e-40,42;CL:0002057,3.05e-40,42;CL:0000473,6.92e-35,48;CL:0000234,6.92e-35,48;CL:0002009,1.71e-34,61;CL:0000557,3.45e-31,67;CL:0000766,1.25e-28,72;CL:0002194,2.21e-27,59;CL:0000576,2.21e-27,59;CL:0000040,2.21e-27,59;CL:0000559,2.21e-27,59;CL:0000839,3.03e-24,66;CL:0000763,2.71e-23,108;CL:0000049,2.71e-23,108;CL:0000738,2.42e-22,136;CL:0001014,1.16e-17,2;CL:0001016,1.16e-17,2;CL:0000037,1.95e-17,168;CL:0002087,5.95e-17,115;CL:0000988,2.25e-16,177;CL:0002031,3.36e-16,120;CL:0002032,1.41e-14,161;CL:0000837,1.41e-14,161;CL:0000226,1.04e-11,3;CL:0000842,1.04e-11,3;CL:0000767,1.87e-11,3;CL:0002393,6.08e-09,9;CL:0002397,6.08e-09,9;CL:0000453,1.36e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.95e-27;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.08e-18!80;UBERON:0001474!1.74e-16!86;UBERON:0004765!6.26e-16!101;UBERON:0001434!6.26e-16!101;UBERON:0002390!7.54e-16!102;UBERON:0003061!7.54e-16!102;UBERON:0002193!1.45e-13!112;UBERON:0002405!1.53e-13!115;UBERON:0002384!1.52e-09!375;UBERON:0002204!9.72e-08!167;UBERON:0002118!5.05e-07!5;UBERON:0004532!5.05e-07!5;UBERON:0003081!5.85e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!2.08e-18!80;UBERON:0001474!1.74e-16!86;UBERON:0004765!6.26e-16!101;UBERON:0001434!6.26e-16!101;UBERON:0002390!7.54e-16!102;UBERON:0003061!7.54e-16!102;UBERON:0002193!1.45e-13!112;UBERON:0002405!1.53e-13!115;UBERON:0002384!1.52e-09!375;UBERON:0002204!9.72e-08!167;UBERON:0002118!5.05e-07!5;UBERON:0004532!5.05e-07!5;UBERON:0003081!5.85e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-27,76;UBERON:0002390,4.71e-26,98;UBERON:0003061,4.71e-26,98;UBERON:0001474,5.20e-25,82;UBERON:0002193,2.32e-23,108;UBERON:0004765,1.51e-22,90;UBERON:0002405,9.92e-22,93;UBERON:0001434,5.16e-20,100;UBERON:0003081,2.56e-12,203;UBERON:0002204,8.35e-11,167 | |||
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| ||
|short_description=p@chr3:4793475..4793490,+ | |short_description=p@chr3:4793475..4793490,+ | ||
}} | }} |
Latest revision as of 21:36, 29 July 2015
Short description: | p@chr3:4793475..4793490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:4793475..4793490, + |
Coexpression cluster: | C656_CD14_immature_Dendritic_Basophils_CD34_CD133_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-27 | 76 |
hematopoietic system | 4.71e-26 | 98 |
blood island | 4.71e-26 | 98 |
bone element | 5.20e-25 | 82 |
hemolymphoid system | 2.32e-23 | 108 |
skeletal element | 1.51e-22 | 90 |
immune system | 9.92e-22 | 93 |
skeletal system | 5.16e-20 | 100 |
lateral plate mesoderm | 2.56e-12 | 203 |
musculoskeletal system | 8.35e-11 | 167 |