FFCP PHASE1:Hg19::chr3:55361260..55361286,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:55361260..55361286,-
|short_description=p@chr3:55361260..55361286,-
|description=CAGE_peak_at_chr3:55361260..55361286,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:55361260..55361286,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr3:55361260..55361286,- | |||
|id=chr3:55361260..55361286,- | |||
|ontology_enrichment_celltype=CL:0000055!4.93e-16!180;CL:0000057!3.05e-13!75;CL:0002620!9.39e-12!23;CL:0000048!2.81e-08!430;CL:0002552!3.76e-08!5;CL:0000723!5.85e-08!436;CL:0000034!1.50e-07!444;CL:0000667!1.86e-07!6;CL:0000058!1.86e-07!6;CL:0000138!1.86e-07!6;CL:0000499!2.90e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.25e-13;1!CL:0002372;1.25e-13;1!CL:0002092;4.39e-12;10!CL:0002540;1.87e-09;6!CL:0000138;2.83e-09;6!CL:0000054;1.05e-07;2!CL:0000137;1.05e-07;2!CL:0000092;1.05e-07;2!CL:0000317;1.87e-07;2!CL:1000448;1.87e-07;2!CL:0002308;1.87e-07;2!CL:0002140;1.87e-07;2!CL:0002593;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,9.73e-14,1;CL:0002372,9.73e-14,1;CL:0002092,4.47e-12,10;CL:0002540,1.91e-09,6;CL:0000058,2.45e-09,6;CL:0000138,2.45e-09,6;CL:0000054,1.05e-07,2;CL:0000137,1.05e-07,2;CL:0000092,1.05e-07,2;CL:0000317,2.12e-07,2;CL:1000448,2.12e-07,2;CL:0002308,2.12e-07,2;CL:0002140,2.12e-07,2;CL:0002593,2.40e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.98e-14;1!DOID:3165;3.98e-14;1!DOID:0060121;3.98e-14;1!DOID:2438;3.98e-14;1!DOID:4418;3.98e-14;1!DOID:201;2.12e-09;6!DOID:0060100;2.12e-09;6!DOID:200;1.05e-07;2!DOID:4305;1.05e-07;2!DOID:4231;1.32e-07;2!DOID:1907;1.32e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.98e-14,1;DOID:3165,3.98e-14,1;DOID:0060121,3.98e-14,1;DOID:2438,3.98e-14,1;DOID:4418,3.98e-14,1;DOID:201,2.16e-09,6;DOID:0060100,2.16e-09,6;DOID:200,1.05e-07,2;DOID:4305,1.05e-07,2;DOID:4231,1.36e-07,2;DOID:1907,1.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.93e-11!45;UBERON:0002416!7.93e-11!45;UBERON:0002097!1.11e-09!40;UBERON:0003102!4.55e-09!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;3.66e-10;12!UBERON:0002419;1.87e-07;2!UBERON:0007771;1.87e-07;2!UBERON:0003297;1.87e-07;2!UBERON:0001821;1.87e-07;2!UBERON:0003487;1.87e-07;2!UBERON:0002456;1.87e-07;2!UBERON:0001820;1.87e-07;2!UBERON:0001474;6.09e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.12e-07,2;UBERON:0007771,2.12e-07,2;UBERON:0003297,2.12e-07,2;UBERON:0001821,2.12e-07,2;UBERON:0003487,2.12e-07,2;UBERON:0001820,2.12e-07,2;UBERON:0005089,2.12e-07,2;UBERON:0005088,2.12e-07,2;UBERON:0002456,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0.50133791063589,0.724232594804119,1.5905718941022,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,1.6623846929051,0,0,0.751190294532984,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.9033987161519,0,0.581051892299796,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,4.57043606916876,0,0,0.480952921509202,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,2.89659637035217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0,0,6.06089616880285,0.251567901752575,3.55924488638614,0,0,0,0.147855149989634,0.159296767163702,0,0.465788870628778,0.829412415681711,1.32920857278997,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.537266523244462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39337735327393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1688842981226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0.50133791063589,0.724232594804119,1.5905718941022,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,1.6623846929051,0,0,0.751190294532984,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.9033987161519,0,0.581051892299796,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,4.57043606916876,0,0,0.480952921509202,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,2.89659637035217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0,0,6.06089616880285,0.251567901752575,3.55924488638614,0,0,0,0.147855149989634,0.159296767163702,0,0.465788870628778,0.829412415681711,1.32920857278997,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.537266523244462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39337735327393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1688842981226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:55361260..55361286,- | |||
}} | }} |
Latest revision as of 22:42, 29 July 2015
Short description: | p@chr3:55361260..55361286, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:55361260..55361286, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 9.73e-14 | 1 |
myotube | 9.73e-14 | 1 |
bone marrow cell | 4.47e-12 | 10 |
mesenchymal stem cell of the bone marrow | 1.91e-09 | 6 |
chondroblast | 2.45e-09 | 6 |
chondrocyte | 2.45e-09 | 6 |
bone matrix secreting cell | 1.05e-07 | 2 |
osteocyte | 1.05e-07 | 2 |
osteoclast | 1.05e-07 | 2 |
sebum secreting cell | 2.12e-07 | 2 |
epithelial cell of sweat gland | 2.12e-07 | 2 |
epithelial cell of skin gland | 2.12e-07 | 2 |
acinar cell of sebaceous gland | 2.12e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.12e-07 | 2 |
epidermis gland | 2.12e-07 | 2 |
gland of integumental system | 2.12e-07 | 2 |
sebaceous gland | 2.12e-07 | 2 |
skin sebaceous gland | 2.12e-07 | 2 |
sweat gland | 2.12e-07 | 2 |
sweat gland placode | 2.12e-07 | 2 |
sebaceous gland placode | 2.12e-07 | 2 |
internal thoracic artery | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.98e-14 | 1 |
skin benign neoplasm | 3.98e-14 | 1 |
integumentary system benign neoplasm | 3.98e-14 | 1 |
dermis tumor | 3.98e-14 | 1 |
cutaneous fibrous histiocytoma | 3.98e-14 | 1 |
connective tissue cancer | 2.16e-09 | 6 |
musculoskeletal system cancer | 2.16e-09 | 6 |
giant cell tumor | 1.05e-07 | 2 |
bone giant cell tumor | 1.05e-07 | 2 |
histiocytoma | 1.36e-07 | 2 |
malignant fibroxanthoma | 1.36e-07 | 2 |