FFCP PHASE1:Hg19::chr3:58551422..58551434,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:58551422..58551434,- | |||
|coexpression_cluster_id=C2113 | |||
|description=CAGE_peak_at_chr3:58551422..58551434,- | |description=CAGE_peak_at_chr3:58551422..58551434,- | ||
|id=chr3:58551422..58551434,- | |id=chr3:58551422..58551434,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.25e-16;3!UBERON:0006222;2.46e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.93e-69!57;UBERON:0005068!6.93e-69!57;UBERON:0006241!6.93e-69!57;UBERON:0007135!6.93e-69!57;UBERON:0007023!6.87e-60!115;UBERON:0002616!1.99e-55!59;UBERON:0001017!1.48e-52!82;UBERON:0002020!1.50e-51!34;UBERON:0003528!1.50e-51!34;UBERON:0000955!1.81e-51!69;UBERON:0006238!1.81e-51!69;UBERON:0001893!1.94e-51!34;UBERON:0005743!1.20e-49!86;UBERON:0002791!3.54e-49!33;UBERON:0002780!3.74e-49!41;UBERON:0001890!3.74e-49!41;UBERON:0006240!3.74e-49!41;UBERON:0003080!8.02e-48!42;UBERON:0001869!3.32e-46!32;UBERON:0003075!9.47e-45!86;UBERON:0007284!9.47e-45!86;UBERON:0000073!5.52e-44!94;UBERON:0001016!5.52e-44!94;UBERON:0002346!2.65e-42!90;UBERON:0002619!4.15e-34!22;UBERON:0000956!2.77e-33!25;UBERON:0000203!2.77e-33!25;UBERON:0000033!2.29e-31!123;UBERON:0003056!1.03e-30!61;UBERON:0000153!2.03e-29!129;UBERON:0007811!2.03e-29!129;UBERON:0001950!7.29e-29!20;UBERON:0004121!1.22e-23!169;UBERON:0000025!3.84e-23!194;UBERON:0000924!7.73e-23!173;UBERON:0006601!7.73e-23!173;UBERON:0003076!1.95e-21!15;UBERON:0003057!1.95e-21!15;UBERON:0002420!1.05e-20!9;UBERON:0007245!1.05e-20!9;UBERON:0010009!1.05e-20!9;UBERON:0010011!1.05e-20!9;UBERON:0000454!1.05e-20!9;UBERON:0004111!2.38e-20!241;UBERON:0002308!3.82e-20!9;UBERON:0000125!3.82e-20!9;UBERON:0000477!5.07e-20!286;UBERON:0000349!2.04e-15!5;UBERON:0009663!4.08e-15!7;UBERON:0000064!1.47e-14!219;UBERON:0004733!3.15e-14!12;UBERON:0002028!3.15e-14!12;UBERON:0007277!3.15e-14!12;UBERON:0001871!9.17e-14!7;UBERON:0004732!5.04e-13!13;UBERON:0002298!2.14e-12!8;UBERON:0000200!2.16e-12!6;UBERON:0000369!4.71e-12!4;UBERON:0002435!4.71e-12!4;UBERON:0000204!4.71e-12!4;UBERON:0010082!4.71e-12!4;UBERON:0000483!1.39e-11!309;UBERON:0000475!2.21e-11!365;UBERON:0000119!2.34e-11!312;UBERON:0002680!3.58e-11!9;UBERON:0001895!3.58e-11!9;UBERON:0010092!3.58e-11!9;UBERON:0002771!2.32e-10!3;UBERON:0002021!7.29e-10!5;UBERON:0005174!7.46e-10!5;UBERON:0001137!7.46e-10!5;UBERON:0002240!8.45e-10!3;UBERON:0005383!8.45e-10!3;UBERON:0005382!8.45e-10!3;UBERON:0000062!8.66e-10!511;UBERON:0006331!1.10e-09!3;UBERON:0000988!6.19e-09!3;UBERON:0000481!9.32e-09!347;UBERON:0000923!1.25e-07!604;UBERON:0005291!1.25e-07!604;UBERON:0006598!1.25e-07!604;UBERON:0002532!1.25e-07!604;UBERON:0002050!1.36e-07!605;UBERON:0005423!1.36e-07!605;UBERON:0000467!1.60e-07!625;UBERON:0000480!1.74e-07!626;UBERON:0001876!1.99e-07!2;UBERON:0001954!1.99e-07!2;UBERON:0003022!1.99e-07!2;UBERON:0002421!1.99e-07!2;UBERON:0002600!1.99e-07!2;UBERON:0000922!2.48e-07!612;UBERON:0001873!3.77e-07!2;UBERON:0010122!3.77e-07!2;UBERON:0000468!6.64e-07!659;UBERON:0002148!8.90e-07!2;UBERON:0009662!8.90e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.69e-30;22!UBERON:0002791;1.56e-27;32!UBERON:0002780;8.72e-27;41!UBERON:0001890;8.72e-27;41!UBERON:0000956;2.61e-26;25!UBERON:0000203;2.61e-26;25!UBERON:0001950;4.93e-25;20!UBERON:0000073;1.89e-24;53!UBERON:0002616;1.89e-24;53!UBERON:0001893;2.78e-24;34!UBERON:0002771;6.82e-23;2!UBERON:0001869;7.78e-23;32!UBERON:0003528;3.95e-21;34!UBERON:0002020;3.95e-21;34!UBERON:0000200;4.61e-17;6!UBERON:0001017;5.74e-17;75!UBERON:0000955;1.61e-16;68!UBERON:0001871;1.02e-14;6!UBERON:0001016;3.71e-13;83!UBERON:0003112;9.91e-13;1!UBERON:0011158;9.91e-13;1!UBERON:0003128;9.91e-13;1!UBERON:0001703;9.91e-13;1!UBERON:0002241;9.91e-13;1!UBERON:0002038;2.46e-12;1!UBERON:0009661;2.46e-12;1!UBERON:0002950;2.46e-12;1!UBERON:0001891;2.46e-12;1!UBERON:0002420;1.41e-11;9!UBERON:0007245;1.41e-11;9!UBERON:0010009;1.41e-11;9!UBERON:0010011;1.41e-11;9!UBERON:0000454;1.41e-11;9!UBERON:0011216;2.79e-10;132!UBERON:0000349;6.22e-10;5!UBERON:0002021;6.80e-10;5!UBERON:0007023;7.88e-10;114!UBERON:0002037;2.17e-08;6!UBERON:0001894;3.35e-07;7!UBERON:0009663;3.35e-07;7!UBERON:0001954;4.82e-07;2!UBERON:0003022;4.82e-07;2!UBERON:0002421;4.82e-07;2!UBERON:0002600;4.82e-07;2!UBERON:0001876;8.52e-07;2!UBERON:0001897;8.52e-07;2!UBERON:0002702;8.52e-07;2!UBERON:0001875;8.52e-07;2!UBERON:0006514;8.52e-07;2!UBERON:0010225;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.44e-41,56;UBERON:0005068,2.44e-41,56;UBERON:0006241,2.44e-41,56;UBERON:0007135,2.44e-41,56;UBERON:0000955,3.00e-38,68;UBERON:0006238,3.00e-38,68;UBERON:0000073,5.50e-38,53;UBERON:0002616,5.50e-38,53;UBERON:0001017,2.99e-36,81;UBERON:0002780,5.64e-36,41;UBERON:0001890,5.64e-36,41;UBERON:0003080,5.64e-36,41;UBERON:0006240,5.64e-36,41;UBERON:0001016,1.65e-32,89;UBERON:0002791,5.23e-32,32;UBERON:0003528,4.12e-30,34;UBERON:0002020,4.12e-30,34;UBERON:0001893,4.12e-30,34;UBERON:0002619,8.02e-30,22;UBERON:0003075,8.44e-28,82;UBERON:0007284,8.44e-28,82;UBERON:0002346,1.97e-26,86;UBERON:0000956,2.70e-26,25;UBERON:0000203,2.70e-26,25;UBERON:0001869,6.44e-26,32;UBERON:0007023,7.04e-26,114;UBERON:0001950,5.13e-25,20;UBERON:0003056,7.16e-24,61;UBERON:0002771,8.55e-23,2;UBERON:0010371,1.45e-21,104;UBERON:0010314,3.86e-19,132;UBERON:0000200,4.14e-17,6;UBERON:0004121,3.40e-16,171;UBERON:0000924,3.40e-16,171;UBERON:0006601,3.40e-16,171;UBERON:0001871,8.50e-15,6;UBERON:0011216,1.29e-13,223;UBERON:0003112,8.85e-13,1;UBERON:0011158,8.85e-13,1;UBERON:0003128,8.85e-13,1;UBERON:0001703,8.85e-13,1;UBERON:0002241,8.85e-13,1;UBERON:0004761,8.85e-13,1;UBERON:0009617,8.85e-13,1;UBERON:0002038,2.20e-12,1;UBERON:0009661,2.20e-12,1;UBERON:0002950,2.20e-12,1;UBERON:0001891,2.20e-12,1;UBERON:0009616,2.20e-12,1;UBERON:0010286,2.20e-12,1;UBERON:0002420,1.22e-11,9;UBERON:0007245,1.22e-11,9;UBERON:0010009,1.22e-11,9;UBERON:0010011,1.22e-11,9;UBERON:0000454,1.22e-11,9;UBERON:0000025,8.74e-11,192;UBERON:0000349,4.76e-10,5;UBERON:0002021,9.28e-10,5;UBERON:0002037,2.17e-08,6;UBERON:0006215,2.17e-08,6;UBERON:0004111,3.36e-08,240;UBERON:0003076,3.22e-07,15;UBERON:0003057,3.22e-07,15;UBERON:0001894,3.35e-07,7;UBERON:0006222,3.35e-07,7;UBERON:0009663,3.56e-07,7;UBERON:0001954,4.83e-07,2;UBERON:0003022,4.83e-07,2;UBERON:0002421,4.83e-07,2;UBERON:0002600,4.83e-07,2;UBERON:0005253,5.11e-07,2;UBERON:0001876,6.07e-07,2;UBERON:0001897,6.42e-07,2;UBERON:0010225,6.42e-07,2;UBERON:0002702,6.80e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.96937182974718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,1.85536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,1.43753037910592,2.06883333267483,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0.795229689809303,3.13267834056624,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,1.22026264901963,1.8778639605975,0,0.776503360757966,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.11743701340006,2.05116364240755,0.252071696221718,0.276629009856872,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,1.2401207790071,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,1.37415926980462,0.297046400327086,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,0,1.57673541466596,0,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,1.96522692137601,0,0,0,0,0,0.12729431655633,0,0.217716747896961,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.96937182974718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,1.85536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,1.43753037910592,2.06883333267483,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0.795229689809303,3.13267834056624,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,1.22026264901963,1.8778639605975,0,0.776503360757966,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.11743701340006,2.05116364240755,0.252071696221718,0.276629009856872,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,1.2401207790071,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,1.37415926980462,0.297046400327086,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,0,1.57673541466596,0,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,1.96522692137601,0,0,0,0,0,0.12729431655633,0,0.217716747896961,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr3:58551422..58551434,- | |short_description=p@chr3:58551422..58551434,- | ||
}} | }} |
Latest revision as of 22:56, 29 July 2015
Short description: | p@chr3:58551422..58551434, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:58551422..58551434, - |
Coexpression cluster: | C2113_brain_medial_hippocampus_diencephalon_amygdala_substantia_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data