FFCP PHASE1:Hg19::chr3:99514927..99514940,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:99514927..99514940,+
|short_description=p@chr3:99514927..99514940,+
|description=CAGE_peak_at_chr3:99514927..99514940,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:99514927..99514940,+ | |||
|coexpression_cluster_id=C1517 | |||
|description=CAGE_peak_at_chr3:99514927..99514940,+ | |||
|id=chr3:99514927..99514940,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.90e-25!180;CL:0000057!6.19e-18!75;CL:0000144!6.48e-10!625;CL:0002371!9.53e-10!591;CL:0000222!1.73e-09!119;CL:0000680!4.18e-09!57;CL:0000056!4.18e-09!57;CL:0000355!4.18e-09!57;CL:0002334!9.52e-09!12;CL:0000548!1.49e-08!679;CL:0000004!1.49e-08!679;CL:0000255!1.49e-08!679;CL:0000012!3.18e-08!682;CL:0000723!3.56e-08!436;CL:0000048!3.67e-08!430;CL:0000183!8.91e-08!59;CL:0000187!1.07e-07!54;CL:0000192!1.07e-07!42;CL:0000514!1.07e-07!42;CL:0000034!2.54e-07!444;CL:0002620!5.17e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.36e-09;23!CL:0002334;1.18e-08;12!CL:0000134;2.31e-08;55!CL:0002615;5.92e-07;3!CL:0000048;6.41e-07;58!CL:0000136;6.97e-07;13!CL:0002580;9.20e-07;3!CL:0002320;9.66e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.94e-16,76;CL:0000723,9.37e-12,433;CL:0000048,1.14e-11,427;CL:0000034,4.02e-11,441;CL:0002620,1.69e-09,23;CL:0000134,1.47e-08,354;CL:0002334,1.73e-08,12;CL:0002320,1.76e-08,361;CL:0000219,1.63e-07,386;CL:0000136,2.29e-07,15;CL:0002615,5.84e-07,3;CL:0002580,9.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.27e-10;5!DOID:450;7.27e-10;5!DOID:66;7.27e-10;5!DOID:423;7.27e-10;5!DOID:0080000;7.27e-10;5!DOID:11722;7.27e-10;5!DOID:2394;8.05e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.61e-10,5;DOID:450,7.61e-10,5;DOID:66,7.61e-10,5;DOID:423,7.61e-10,5;DOID:0080000,7.61e-10,5;DOID:11722,7.61e-10,5;DOID:2394,4.89e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.61e-11!79;UBERON:0007798!6.61e-11!79;UBERON:0004535!9.53e-09!110;UBERON:0000914!1.28e-08!83;UBERON:0002329!1.28e-08!83;UBERON:0003077!1.28e-08!83;UBERON:0003059!1.28e-08!83;UBERON:0007282!1.28e-08!83;UBERON:0009618!1.28e-08!83;UBERON:0007285!1.28e-08!83;UBERON:0000475!4.08e-08!365;UBERON:0001009!4.38e-08!113;UBERON:0001134!8.86e-08!61;UBERON:0002036!8.86e-08!61;UBERON:0003082!8.86e-08!61;UBERON:0004872!9.78e-08!84;UBERON:0003914!9.81e-08!118;UBERON:0002385!1.13e-07!63;UBERON:0001015!1.13e-07!63;UBERON:0000383!1.13e-07!63;UBERON:0005256!2.60e-07!143;UBERON:0002100!2.94e-07!216;UBERON:0001981!2.97e-07!60;UBERON:0007500!2.97e-07!60;UBERON:0004537!2.97e-07!60;UBERON:0006965!2.97e-07!60;UBERON:0000055!3.56e-07!69;UBERON:0004290!5.55e-07!70;UBERON:0000490!9.47e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.34e-11;6!UBERON:0002358;3.34e-11;6!UBERON:0003684;3.34e-11;6!UBERON:0001178;3.34e-11;6!UBERON:0004457;2.97e-09;9!UBERON:0000042;2.97e-09;9!UBERON:0002097;2.66e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.32e-11,6;UBERON:0002358,4.32e-11,6;UBERON:0003684,4.32e-11,6;UBERON:0001178,4.32e-11,6;UBERON:0002384,3.14e-09,371;UBERON:0002097,5.32e-09,41;UBERON:0002199,1.11e-08,46;UBERON:0002416,1.11e-08,46 | |||
|phase1_expression=7.08545679155171,22.4805550085532,6.3429481843187,28.0205235388765,8.49226079411847,29.6595098194125,7.59899634504932,0.631719873426831,0,0,0,0,0,0.618831764800233,0.662794751455832,2.01697543935533,0.602694528023977,0.730310090387373,0,0.369363174230364,0.408001382488506,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,1.0843174571537,1.50401373190767,1.73815822752988,0.795285947051099,2.43317435151318,1.13441780596881,1.77383517970051,2.19586964232815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20094433552054,0.417989933073621,0.258416759169329,0,0,0.402829317109147,1.52054421143703,0.488124115096339,0,2.43042584364528,0.803697554556718,0.673588117878509,0.112611480483322,0,0,0,0,0,0,5.96366342034382,0.506522046658319,0.397227542439656,1.72101972449288,0.709336764396714,1.68203280042692,1.06748995729705,0.74000264525148,0.311211035399766,0.808264032418128,0.163461903113459,0.454072282934794,1.15235184896,0,0,0,0.448346041655403,0.117434498643765,0,0,0.61246251376468,0.737005903870608,0,1.18800285728205,6.42894016124248,0,0,0.336672227908132,0.500474079487857,0,0.438977620880838,6.12975591598039,2.55404700141215,2.38207584636044,13.4542226766646,9.1829677191984,4.4505699243508,5.70173082560364,2.37020817248409,15.4584324027377,12.8420630868797,1.0126579934476,0.974370051611986,7.57301322732343,5.33889412125336,0.484938170456436,44.0211894720602,8.7654325458047,0,0,0,0,0,0,0,0,0,0,0,4.5026865673502,0,5.57241513638375,2.16563844500876,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0.370353780634118,0,0,0,0.231860809950154,1.05667824812239,1.15493158208859,0.925971025153221,1.52203321787679,0,0,0,0,0,0,0,0,0.358234090811393,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.387815147273333,0,0,2.92531928243358,2.08014873822732,0.257207374262142,0,0.799266537048298,1.85871391755592,1.08524321078289,0.823240336780769,0,2.13235169245527,2.37585561880029,0.904318131178758,0,2.59929777073348,0,0,0,4.0736225433569,5.7430967917057,0,4.63300181336253,8.01357657946495,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.2269149171914,0,0.813795071099207,2.49565033836969,2.3195768543631,2.20783381047509,0.702848489956279,3.00946099727719,9.09630016223939,0,5.97803038681893,0.553107505625109,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,3.2254015016441,20.4104424473123,8.41980283299221,1.02511319404561,3.58195074346692,5.95159508231348,8.90508398669946,0.616838775210622,0.532685175939381,0.574890092096664,1.03850885836724,0.116210378459959,0,0,0,0.918515585316854,0.728364672026868,0.131124414959424,0.902399225814824,0.0770153371044148,0,0,0.422206515571503,0,0,0.863663664408557,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,1.02580050046556,0.984043937099117,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,4.82051789532479,0.290012154876366,0,0,0.413509717453592,0.214840489736547,0.145016693914229,0.0852266274161009,0.979352392114111,0.495854746082934,0.192190067365106,0.765676274967505,0,0,1.5740617341532,0.6970372701606,0.308033580176089,0,0,0,0.715624433709956,0.744316738719335,2.21465597303108,3.43134349062885,0,0,0,0,1.43897966066652,0.274537029736055,0.353437207037059,0.404364963146632,1.58510321173008,0,0,2.43713489631284,0,1.63799893689583,0.424216295861138,0,0.551365343546124,1.32687795048244,3.5076070820301,0.578775534266688,0.655894752046633,0.608731130888112,0.30982349809975,0.845086807596724,0.717056761020258,3.34046739444612,2.49669736036875,0,0,1.64647446479951,0.379473173765715,0,0.384888450902048,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779160935160341,0,0,2.98871982376605,0,0,0,0,8.3980688668688,0.449341755736634,0,0,0,0,2.22273980289274,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,1.4655614944298,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0,0,0,0,0.240476460754601,0,0.599428828746391,0,0,0,0,0,0,1.35904206073614,1.569042694685,0.815985741090574,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0,3.22717210799121,0,0,0,0,0,0.864221491201268,0,0,0,1.70388021785422,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,2.34167452903441,0,0,0.467426619694449,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| ||
|short_description=p@chr3:99514927..99514940,+ | |||
}} | }} |
Latest revision as of 00:12, 30 July 2015
Short description: | p@chr3:99514927..99514940, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99514927..99514940, + |
Coexpression cluster: | C1517_Fibroblast_Preadipocyte_Adipocyte_basal_bone_Osteoblast_pleomorphic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.94e-16 | 76 |
somatic stem cell | 9.37e-12 | 433 |
multi fate stem cell | 1.14e-11 | 427 |
stem cell | 4.02e-11 | 441 |
skin fibroblast | 1.69e-09 | 23 |
mesenchymal cell | 1.47e-08 | 354 |
preadipocyte | 1.73e-08 | 12 |
connective tissue cell | 1.76e-08 | 361 |
motile cell | 1.63e-07 | 386 |
fat cell | 2.29e-07 | 15 |
adipocyte of omentum tissue | 5.84e-07 | 3 |
preadipocyte of the breast | 9.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.32e-11 | 6 |
peritoneum | 4.32e-11 | 6 |
abdominal cavity | 4.32e-11 | 6 |
visceral peritoneum | 4.32e-11 | 6 |
connective tissue | 3.14e-09 | 371 |
skin of body | 5.32e-09 | 41 |
integument | 1.11e-08 | 46 |
integumental system | 1.11e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.61e-10 | 5 |
myotonic disease | 7.61e-10 | 5 |
muscle tissue disease | 7.61e-10 | 5 |
myopathy | 7.61e-10 | 5 |
muscular disease | 7.61e-10 | 5 |
myotonic dystrophy | 7.61e-10 | 5 |
ovarian cancer | 4.89e-08 | 14 |