FFCP PHASE1:Hg19::chr4:10083007..10083022,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:10083007..10083022,-
|short_description=p@chr4:10083007..10083022,-
|description=CAGE_peak_at_chr4:10083007..10083022,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:10083007..10083022,- | |||
|description=CAGE_peak_at_chr4:10083007..10083022,- | |||
|id=chr4:10083007..10083022,- | |||
|ontology_enrichment_celltype=CL:0000144!1.34e-16!625;CL:0000055!7.02e-16!180;CL:0002371!1.33e-14!591;CL:0000548!2.17e-13!679;CL:0000004!2.17e-13!679;CL:0000255!2.17e-13!679;CL:0000012!8.71e-13!682;CL:0000048!5.79e-10!430;CL:0000723!7.41e-10!436;CL:0000034!1.20e-09!444;CL:0000003!2.06e-09!722;CL:0000057!2.80e-09!75;CL:0000222!4.41e-09!119;CL:0000393!1.03e-08!60;CL:0000211!1.03e-08!60;CL:0000359!1.34e-08!32;CL:0000192!2.04e-08!42;CL:0000514!2.04e-08!42;CL:0000183!2.63e-08!59;CL:0000680!4.20e-08!57;CL:0000056!4.20e-08!57;CL:0000355!4.20e-08!57;CL:0000187!4.78e-08!54;CL:0002321!8.38e-08!248;CL:0000220!1.44e-07!246;CL:0002334!5.35e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.02e-14;12!CL:0002615;5.39e-08;3!CL:0002622;8.32e-08;3!CL:0002579;1.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.93e-14,12;CL:0002615,4.60e-08,3;CL:0002622,8.09e-08,3;CL:0002579,1.54e-07,3;CL:0000136,5.70e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.31e-10!79;UBERON:0007798!7.31e-10!79;UBERON:0001637!1.04e-09!42;UBERON:0003509!1.04e-09!42;UBERON:0004572!1.04e-09!42;UBERON:0000486!2.03e-08!82;UBERON:0004290!3.07e-08!70;UBERON:0000914!3.23e-08!83;UBERON:0002329!3.23e-08!83;UBERON:0003077!3.23e-08!83;UBERON:0003059!3.23e-08!83;UBERON:0007282!3.23e-08!83;UBERON:0009618!3.23e-08!83;UBERON:0007285!3.23e-08!83;UBERON:0000055!7.37e-08!69;UBERON:0004573!1.43e-07!33;UBERON:0004571!1.43e-07!33;UBERON:0005256!3.36e-07!143;UBERON:0004535!4.02e-07!110;UBERON:0001134!7.29e-07!61;UBERON:0002036!7.29e-07!61;UBERON:0003082!7.29e-07!61;UBERON:0001009!8.99e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.13e-14;6!UBERON:0002358;6.13e-14;6!UBERON:0003684;6.13e-14;6!UBERON:0001178;6.13e-14;6!UBERON:0004457;5.11e-12;9!UBERON:0000042;5.11e-12;9!UBERON:0002367;6.47e-10;11!UBERON:0010147;6.47e-10;11!UBERON:0003937;5.46e-09;12!UBERON:0005399;5.46e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.30e-14,6;UBERON:0002358,6.30e-14,6;UBERON:0003684,6.30e-14,6;UBERON:0001178,6.30e-14,6;UBERON:0002367,9.28e-10,11;UBERON:0010147,9.28e-10,11;UBERON:0009846,9.28e-10,11;UBERON:0003353,9.28e-10,11;UBERON:0004902,9.28e-10,11;UBERON:0003820,9.28e-10,11;UBERON:0009847,9.28e-10,11;UBERON:0004122,6.99e-09,15;UBERON:0003937,7.57e-09,12;UBERON:0005399,7.57e-09,12;UBERON:0004457,9.73e-09,12;UBERON:0000042,9.73e-09,12;UBERON:0000162,2.03e-07,14;UBERON:0001353,2.03e-07,14;UBERON:0000163,2.03e-07,14;UBERON:0006866,2.03e-07,14;UBERON:0000164,2.03e-07,14;UBERON:0000931,2.03e-07,14 | |||
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|phase1_expression=0.726713517082227,1.92690471501885,1.55049844505568,2.00146596706261,2.23480547213644,1.74467704820074,0,1.26343974685366,0.261185628199839,0,0,0,0.791300934685361,0,0.662794751455832,0.672325146451775,0,0.730310090387373,0.975865597581014,0.246242116153576,1.22400414746552,0.626909442956176,0.286235987131057,0.410623275218653,0.251085279189606,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0.822335776043652,1.23882548358041,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0.564727018627814,0,0.224723484445085,0.918251677112708,0,0.639337125799041,0.659702600373432,0,0.426224750532694,1.16083695451434,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.501559486172034,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0,0.493313713811028,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.869079113764942,0,0,0.283604451492204,0.665188192387692,0.87834785693126,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0.371457501329565,0.596287222100115,0,0,0,1.67799774483962,2.20094433552054,0.626984899610432,0.258416759169329,0,0.33472061276467,3.22263453687318,0,4.14905497831888,0.735326160691737,0,1.25019619597712,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,3.29239330327907,0.132409180813219,0.860509862246441,3.54668382198357,0,0,1.48000529050296,0.622422070799533,0.67355336034844,0.817309515567294,0.756787138224657,0.576175924479999,0,1.5608003841516,1.1409436430889,1.04614076386261,0.704606991862589,0.323745888736263,0.421352420106746,0.61246251376468,0.122834317311768,0.516628905878827,0,0.989067717114227,0.910161361938026,1.43723628363248,0.168336113954066,0.375355559615893,0.277064115484183,0,0.30648779579902,0.300476117813194,0.226864366320042,0,0.213557388818567,0,0.600182192168805,0.206105058476878,0.772921620136887,0.930584281657949,0.168776332241266,0.876933046450788,0.252433774244115,0.368199594569197,0.484938170456436,0,1.10827308050404,0,0.386521706326594,0,0.573609190778008,0.487894824518382,0.265059536642971,0.580969714347592,0.10366105501537,0,1.09493207722749,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,2.21446636387394,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0.171567810298526,0.439001141634502,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0.433099343283221,0.925971025153221,1.71228737011138,0,1.71697232418975,0,0.234004265139238,0,0,1.00789276919316,0.425325291727159,0,0,0,0,0.264145302039678,0.207328115540772,0.864719720501769,0.50496973370552,0,4.58386110669933,3.51652341630141,0,0.308482478109971,0.300343057843917,0,0.560655421726804,0.43596006883328,0.07333828582095,0.387815147273333,0,1.690605505112,1.59562869950922,1.04007436911366,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,3.61727252471503,0,1.69954085009497,1.2162378064119,0.502257091432126,4.21667878966063,0,0,0,0.289562613335158,1.02738161275192,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0,0,0.542530047399471,1.03985430765404,0.892144943985809,0,0.234282829985426,1.20378439891088,2.27407504055985,0,0,0.184369168541703,0.868836144680828,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0.30239029332968,1.48864684691266,0.153461973288062,1.68396056659844,1.15325234330131,1.53512174720011,2.0911009748669,1.48418066444991,0.308419387605311,2.66342587969691,1.47828880824856,0.519254429183621,1.62694529843943,0.483437798366489,9.62431057455767,1.10497186723076,1.14814448164607,1.63882051206045,7.86746489756545,0.902399225814824,0.308061348417659,0,0,0.211103257785751,0,0.680374821106063,0.215915916102139,1.54227252690289,0.812839312631559,2.00675909541941,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,2.62411716559765,0,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,1.6068392984416,0.580024309752732,0.154048617114644,0.921022048356777,0.827019434907183,0.537101224341368,0.435050081742686,0.255679882248303,0.267096106940212,1.32227932288782,0.768760269460425,0,0.2023155617111,3.253918845081,0.62962469366128,0.6970372701606,0.616067160352178,1.06461206063404,0,0.9266210955196,0.572499546967965,0.372158369359667,0.632758849437452,0.38126038784765,0,1.28381696410176,0.318203247925937,2.35484592059769,0.359744915166629,0.823611089208164,0.471249609382746,0.404364963146632,4.75530963519025,0.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| ||
|short_description=p@chr4:10083007..10083022,- | |||
}} | }} |
Latest revision as of 00:20, 30 July 2015
Short description: | p@chr4:10083007..10083022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:10083007..10083022, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.93e-14 | 12 |
adipocyte of omentum tissue | 4.60e-08 | 3 |
prostate stromal cell | 8.09e-08 | 3 |
omentum preadipocyte | 1.54e-07 | 3 |
fat cell | 5.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.30e-14 | 6 |
peritoneum | 6.30e-14 | 6 |
abdominal cavity | 6.30e-14 | 6 |
visceral peritoneum | 6.30e-14 | 6 |
prostate gland | 9.28e-10 | 11 |
male accessory sex gland | 9.28e-10 | 11 |
embryonic cloacal epithelium | 9.28e-10 | 11 |
epithelium of hindgut | 9.28e-10 | 11 |
urogenital sinus epithelium | 9.28e-10 | 11 |
prostate bud | 9.28e-10 | 11 |
prostate field | 9.28e-10 | 11 |
genitourinary system | 6.99e-09 | 15 |
sex gland | 7.57e-09 | 12 |
male reproductive gland | 7.57e-09 | 12 |
cavity lining | 9.73e-09 | 12 |
serous membrane | 9.73e-09 | 12 |
cloaca | 2.03e-07 | 14 |
anal region | 2.03e-07 | 14 |
embryonic cloaca | 2.03e-07 | 14 |
terminal part of digestive tract | 2.03e-07 | 14 |
primitive urogenital sinus | 2.03e-07 | 14 |
proctodeum | 2.03e-07 | 14 |