FFCP PHASE1:Hg19::chr4:108984808..108984820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:108984808..108984820,- | |||
|coexpression_cluster_id=C386 | |coexpression_cluster_id=C386 | ||
|description=CAGE_peak_at_chr4:108984808..108984820,- | |description=CAGE_peak_at_chr4:108984808..108984820,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!2.00e-15!6;CL:0000623!1.79e-12!3;CL:0000825!1.79e-12!3;CL:0000838!4.18e-12!52;CL:0000842!4.39e-12!3;CL:0000084!7.93e-12!25;CL:0000827!7.93e-12!25;CL:0000542!8.13e-12!53;CL:0000051!8.13e-12!53;CL:0000224!3.53e-09!4 | |ontology_enrichment_celltype=CL:0000080!2.00e-15!6;CL:0000623!1.79e-12!3;CL:0000825!1.79e-12!3;CL:0000838!4.18e-12!52;CL:0000842!4.39e-12!3;CL:0000084!7.93e-12!25;CL:0000827!7.93e-12!25;CL:0000542!8.13e-12!53;CL:0000051!8.13e-12!53;CL:0000224!3.53e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25!CL:0000542;3.67e-09;53 | |ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25!CL:0000542;3.67e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;3.67e-09;53 | |ontology_enrichment_development_v019=CL:0000051;3.67e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;9.39e-14;8!DOID:1240;1.53e-08;39!DOID:2531;3.55e-08;51!DOID:0060083;3.55e-08;51 | |ontology_enrichment_disease_v019=DOID:1036;9.39e-14;8!DOID:1240;1.53e-08;39!DOID:2531;3.55e-08;51!DOID:0060083;3.55e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,9.39e-14,8;DOID:1240,2.03e-11,39;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr4:108984808..108984820,- | |short_description=p@chr4:108984808..108984820,- | ||
}} | }} |
Latest revision as of 00:46, 30 July 2015
Short description: | p@chr4:108984808..108984820, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:108984808..108984820, - |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.64e-17 | 25 |
pro-T cell | 4.64e-17 | 25 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.39e-14 | 8 |
leukemia | 2.03e-11 | 39 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |