FFCP PHASE1:Hg19::chr4:109075597..109075600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:109075597..109075600,- | |||
|coexpression_cluster_id=C4357 | |||
|description=CAGE_peak_at_chr4:109075597..109075600,- | |description=CAGE_peak_at_chr4:109075597..109075600,- | ||
|id=chr4:109075597..109075600,- | |id=chr4:109075597..109075600,- | ||
|ontology_enrichment_celltype=CL:0000791!3.83e-17!18;CL:0000789!3.83e-17!18;CL:0002420!3.83e-17!18;CL:0002419!3.83e-17!18;CL:0000790!3.83e-17!18;CL:0000084!6.45e-16!25;CL:0000827!6.45e-16!25;CL:0000625!1.18e-12!11;CL:0000542!8.00e-11!53;CL:0000051!8.00e-11!53;CL:0000838!3.58e-10!52;CL:0000624!1.69e-07!6 | |ontology_enrichment_celltype=CL:0000791!3.83e-17!18;CL:0000789!3.83e-17!18;CL:0002420!3.83e-17!18;CL:0002419!3.83e-17!18;CL:0000790!3.83e-17!18;CL:0000084!6.45e-16!25;CL:0000827!6.45e-16!25;CL:0000625!1.18e-12!11;CL:0000542!8.00e-11!53;CL:0000051!8.00e-11!53;CL:0000838!3.58e-10!52;CL:0000624!1.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;8.84e-31;25!CL:0000791;1.68e-28;18!CL:0000789;1.68e-28;18!CL:0002419;1.68e-28;18!CL:0000625;1.87e-18;11!CL:0000624;1.21e-13;6!CL:0000542;9.01e-09;53!CL:0000815;2.70e-07;2!CL:0000792;2.70e-07;2!CL:0002677;2.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.25e-30,25;CL:0000827,1.25e-30,25;CL:0000791,2.11e-28,18;CL:0000789,2.11e-28,18;CL:0002420,2.11e-28,18;CL:0002419,2.11e-28,18;CL:0000790,2.11e-28,18;CL:0000625,1.61e-18,11;CL:0000542,7.39e-18,53;CL:0000051,7.39e-18,53;CL:0000838,2.56e-16,52;CL:0000624,1.85e-13,6;CL:0002087,2.66e-08,115;CL:0000815,2.99e-07,2;CL:0000792,2.99e-07,2;CL:0002677,2.99e-07,2;CL:0000738,4.34e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.68e-28;18!CL:0000051;9.01e-09;53 | |||
|ontology_enrichment_disease=DOID:1036!5.07e-07!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.21e-15!115;UBERON:0000178!6.31e-13!15;UBERON:0000179!6.31e-13!15;UBERON:0000463!6.31e-13!15;UBERON:0001049!6.88e-07!57;UBERON:0005068!6.88e-07!57;UBERON:0006241!6.88e-07!57;UBERON:0007135!6.88e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.39e-21;15!UBERON:0000179;5.39e-21;15!UBERON:0000463;5.39e-21;15!UBERON:0002390;6.07e-12;32!UBERON:0002370;1.51e-08;2!UBERON:0005058;1.51e-08;2!UBERON:0009113;1.51e-08;2!UBERON:0002193;3.00e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.84e-21,15;UBERON:0000179,6.84e-21,15;UBERON:0000463,6.84e-21,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.868043482863407,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,1.29096936716765,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,3.14735632182133,2.75107533924415,1.02800749499755,1.5046784585161,1.30368906653436,2.8406868344084,1.94826728407911,0.222820913770347,1.17842362989935,1.10766947291811,0.812411591295047,0.25618263945135,0.130059347559878,4.43982342429925,2.76350017785848,4.05724320029073,1.77943875794473,5.35081656179426,8.36284190439814,1.58633079776593,0.766440987203842,0.34362744548263,1.77113784413652,3.18565414324097,7.81300144627702,0.950452044448374,1.80690142893327,1.15187950038977,2.49861453104692,1.89421801635213,0.821127996921047,0.80642697289893,1.06976078313403,4.19990771260117,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,1.28343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,1.6541442089831,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,2.29391162142713,2.27858874869665,3.33524485640905,4.93634727703433,5.18778648954174,4.32025149790492,2.37937552888281,0,0,0,1.11481905075431,1.44269212976445,10.3867091288685,1.11598390910176,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,8.17546385565892,0.784901281975124,0.498635045700469,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0.635746315921515,0,0,0,0.649165919226273,0.995261931078505,0.0884575645033392,0,0.889563386041866,0.247127877893006,0.104421949505455,0.202203398942031,0,0,0.364909578431332,0,0,0,6.04953580243319,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0.274083849293502,0,0.189932387867636,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.268733889946905,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0.170388021785422,0,0,0,0.258565912723101,0.66116300871345,0,0,0.320362237703084,0.471612915298998,0.414239055347196,2.97699613087171,1.18566979138767,0.365377795142688,0,0,0,0,0,1.25643277000187,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0.151649117541648,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.276516872303462,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.425149840203366,0.123935764259002,0,0,4.65284295507395,0,0,0,0.0642292250964595,0,0,0.615349092722265,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,1.09651553371436,0,0,0,0,0,0,0.227662191351298,0,0,0,0.40781839786099,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0.971421986118279,0,3.18321240258189,0,2.14597555874024,0,1.05673990496671,0,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,1.6906229103336,0,0.0939839179798536,0.193373663920732,0.399764623699716,0,0,0,0,0.917458566809082,0.143339583151451,1.41994405973866,0,0,2.1161073620616,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0,0.803892390468535,0,0.310298987585686,0.639701945702943,0.23806443146374,5.10252387704448,12.9736152878343,0,0.0636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| ||
|short_description=p@chr4:109075597..109075600,- | |short_description=p@chr4:109075597..109075600,- | ||
}} | }} |
Latest revision as of 00:46, 30 July 2015
Short description: | p@chr4:109075597..109075600, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:109075597..109075600, - |
Coexpression cluster: | C4357_acute_thymus_chronic_CD4_Hodgkin_CD8_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.25e-30 | 25 |
pro-T cell | 1.25e-30 | 25 |
mature alpha-beta T cell | 2.11e-28 | 18 |
alpha-beta T cell | 2.11e-28 | 18 |
immature T cell | 2.11e-28 | 18 |
mature T cell | 2.11e-28 | 18 |
immature alpha-beta T cell | 2.11e-28 | 18 |
CD8-positive, alpha-beta T cell | 1.61e-18 | 11 |
lymphocyte | 7.39e-18 | 53 |
common lymphoid progenitor | 7.39e-18 | 53 |
lymphoid lineage restricted progenitor cell | 2.56e-16 | 52 |
CD4-positive, alpha-beta T cell | 1.85e-13 | 6 |
nongranular leukocyte | 2.66e-08 | 115 |
regulatory T cell | 2.99e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.99e-07 | 2 |
naive regulatory T cell | 2.99e-07 | 2 |
leukocyte | 4.34e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 6.84e-21 | 15 |
haemolymphatic fluid | 6.84e-21 | 15 |
organism substance | 6.84e-21 | 15 |