FFCP PHASE1:Hg19::chr4:177592751..177592777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:177592751..177592777,- | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr4:177592751..177592777,- | |description=CAGE_peak_at_chr4:177592751..177592777,- | ||
|id=chr4:177592751..177592777,- | |id=chr4:177592751..177592777,- | ||
|ontology_enrichment_celltype=CL:0002536!2.51e-08!2;CL:0002617!7.77e-08!2 | |ontology_enrichment_celltype=CL:0002536!2.51e-08!2;CL:0002617!7.77e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002536;3.11e-50;2!CL:0002577;3.33e-34;3!CL:0000349;8.06e-33;19!CL:0002617;1.21e-13;2!CL:0000632;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,5.15e-50,2;CL:0002577,3.33e-34,3;CL:0000349,8.07e-33,19;CL:0002617,1.21e-13,2;CL:0000632,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.62e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002771!6.68e-10!3;UBERON:0007023!1.01e-09!115;UBERON:0001987!1.29e-08!4;UBERON:0004340!1.29e-08!4;UBERON:0005631!1.31e-08!14;UBERON:0000158!1.31e-08!14;UBERON:0000200!2.69e-08!6 | |ontology_enrichment_uberon=UBERON:0002771!6.68e-10!3;UBERON:0007023!1.01e-09!115;UBERON:0001987!1.29e-08!4;UBERON:0004340!1.29e-08!4;UBERON:0005631!1.31e-08!14;UBERON:0000158!1.31e-08!14;UBERON:0000200!2.69e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.46e-26;24!UBERON:0001987;5.94e-26;4!UBERON:0000305;3.53e-15;7!UBERON:0005631;6.28e-11;10!UBERON:0000158;6.28e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.03e-29,14;UBERON:0000158,9.03e-29,14;UBERON:0000478,4.46e-26,24;UBERON:0001987,5.94e-26,4;UBERON:0004340,5.94e-26,4;UBERON:0003124,2.65e-15,7;UBERON:0000305,4.07e-15,7;UBERON:0004871,2.34e-13,8 | |||
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|phase1_expression=1.45342703416445,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,5.46103430325431,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48757200049526,0,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858452096273142,0.223171457441873,1.34366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0.961086713109252,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:177592751..177592777,- | |short_description=p@chr4:177592751..177592777,- | ||
}} | }} |
Latest revision as of 03:39, 30 July 2015
Short description: | p@chr4:177592751..177592777, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:177592751..177592777, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 5.15e-50 | 2 |
placental epithelial cell | 3.33e-34 | 3 |
extraembryonic cell | 8.07e-33 | 19 |
adipocyte of breast | 1.21e-13 | 2 |
hepatic stellate cell | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.03e-29 | 14 |
membranous layer | 9.03e-29 | 14 |
extraembryonic structure | 4.46e-26 | 24 |
placenta | 5.94e-26 | 4 |
allantois | 5.94e-26 | 4 |
chorion | 2.65e-15 | 7 |
amnion | 4.07e-15 | 7 |
somatic layer of lateral plate mesoderm | 2.34e-13 | 8 |