FFCP PHASE1:Hg19::chr5:1045108..1045137,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:1045108..1045137,+ | |||
|coexpression_cluster_id=C1947 | |||
|description=CAGE_peak_at_chr5:1045108..1045137,+ | |description=CAGE_peak_at_chr5:1045108..1045137,+ | ||
|id=chr5:1045108..1045137,+ | |id=chr5:1045108..1045137,+ | ||
|ontology_enrichment_celltype=CL:0000632!1.20e-09!2 | |ontology_enrichment_celltype=CL:0000632!1.20e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:1000487;3.61e-34;2!CL:0000214;3.27e-23;3!CL:0000632;4.09e-23;3!CL:0000327;1.24e-18;15!CL:0000499;1.54e-10;28!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9!CL:0000151;5.82e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,3.61e-34,2;CL:0000214,3.27e-23,3;CL:0000632,4.09e-23,3;CL:0000327,1.24e-18,15;CL:0000499,1.54e-10,28;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9;CL:0000151,1.92e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006915;3.27e-23;3!UBERON:0007616;3.27e-23;3!UBERON:0002217;3.27e-23;3!UBERON:0002018;3.27e-23;3!UBERON:0004905;1.35e-09;8!UBERON:0000982;1.35e-09;8!UBERON:0004770;1.35e-09;8!UBERON:0004457;1.12e-08;9!UBERON:0000042;1.12e-08;9!UBERON:0002367;2.32e-07;11!UBERON:0010147;2.32e-07;11!UBERON:0003937;7.48e-07;12!UBERON:0005399;7.48e-07;12!UBERON:0000486;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.27e-23,3;UBERON:0007616,3.27e-23,3;UBERON:0002217,3.27e-23,3;UBERON:0002018,3.27e-23,3;UBERON:0004905,1.35e-09,8;UBERON:0000982,1.35e-09,8;UBERON:0004770,1.35e-09,8;UBERON:0002367,2.32e-07,11;UBERON:0010147,2.32e-07,11;UBERON:0009846,2.32e-07,11;UBERON:0003353,2.32e-07,11;UBERON:0004902,2.32e-07,11;UBERON:0003820,2.32e-07,11;UBERON:0009847,2.32e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12;UBERON:0004457,7.92e-07,12;UBERON:0000042,7.92e-07,12 | |||
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| ||
|short_description=p@chr5:1045108..1045137,+ | |short_description=p@chr5:1045108..1045137,+ | ||
}} | }} |
Latest revision as of 08:27, 30 July 2015
Short description: | p@chr5:1045108..1045137, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1045108..1045137, + |
Coexpression cluster: | C1947_Smooth_synovial_small_gastric_parietal_Cardiac_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 3.61e-34 | 2 |
synovial cell | 3.27e-23 | 3 |
hepatic stellate cell | 4.09e-23 | 3 |
extracellular matrix secreting cell | 1.24e-18 | 15 |
stromal cell | 1.54e-10 | 28 |
GAG secreting cell | 1.12e-08 | 9 |
carbohydrate secreting cell | 1.12e-08 | 9 |
secretory cell | 1.92e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.27e-23 | 3 |
layer of synovial tissue | 3.27e-23 | 3 |
synovial joint | 3.27e-23 | 3 |
synovial membrane of synovial joint | 3.27e-23 | 3 |
articulation | 1.35e-09 | 8 |
skeletal joint | 1.35e-09 | 8 |
articular system | 1.35e-09 | 8 |
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |
cavity lining | 7.92e-07 | 12 |
serous membrane | 7.92e-07 | 12 |