Personal tools

FFCP PHASE1:Hg19::chr5:113697798..113697814,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=3781
|EntrezGene=entrezgene:3781
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=6291
|HGNC=HGNC:6291
|TSSclassifier=not
|TSSclassifier=strong
|UniProt=Q9H2S1,Q6PJI0
|UniProt=uniprot:Q9H2S1,uniprot:Q6PJI0
|association_with_transcript=-201bp_to_ENST00000264773,NM_021614,uc003kqo.2_5end
|association_with_transcript=-201bp_to_ENST00000264773,NM_021614,uc003kqo.2_5end
|cluster_id=chr5:113697798..113697814,+
|coexpression_cluster_id=C2799
|coexpression_cluster_id=C2799
|description=CAGE_peak_3_at_KCNN2_5end
|description=CAGE_peak_3_at_KCNN2_5end

Revision as of 08:48, 30 July 2015

Short description:p3@KCNN2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_KCNN2_5end
Coexpression cluster:C2799_hippocampus_cerebellum_pituitary_amygdala_olfactory_middle_medial
Association with transcript: -201bp_to_ENST00000264773, NM_021614, uc003kqo.2_5end
EntrezGene:3781
HGNC: 6291
UniProt: Q9H2S1Q6PJI0
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
2
4
6
8
10
12




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data