FFCP PHASE1:Hg19::chr5:121409743..121409755,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:121409743..121409755,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121409743..121409755,- | |||
|id=chr5:121409743..121409755,- | |||
|ontology_enrichment_celltype=CL:0000055!1.48e-28!180;CL:0000057!6.21e-25!75;CL:0000048!1.64e-11!430;CL:0000723!6.81e-11!436;CL:0002620!7.52e-11!23;CL:0002334!9.43e-11!12;CL:0000034!4.19e-10!444;CL:0000144!2.44e-09!625;CL:0002371!8.59e-09!591;CL:0000680!3.10e-08!57;CL:0000056!3.10e-08!57;CL:0000355!3.10e-08!57;CL:0000192!4.75e-08!42;CL:0000514!4.75e-08!42;CL:0000187!2.27e-07!54;CL:0000499!3.48e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.99e-11;3!CL:0000388;2.99e-11;3!CL:0002334;2.36e-09;12!CL:0002561;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.18e-17,76;CL:0000135,2.68e-11,3;CL:0000388,2.68e-11,3;CL:0002334,1.20e-09,12;CL:0002561,1.40e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.05e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.81e-11;3!DOID:127;9.81e-11;3!DOID:0060072;3.75e-08;4!DOID:3350;7.69e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.48e-11,3;DOID:127,4.48e-11,3;DOID:0060072,2.10e-08,4;DOID:3350,1.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.85e-08!61;UBERON:0002036!4.85e-08!61;UBERON:0003082!4.85e-08!61;UBERON:0004290!8.35e-08!70;UBERON:0002385!1.56e-07!63;UBERON:0001015!1.56e-07!63;UBERON:0000383!1.56e-07!63;UBERON:0000914!4.95e-07!83;UBERON:0002329!4.95e-07!83;UBERON:0003077!4.95e-07!83;UBERON:0003059!4.95e-07!83;UBERON:0007282!4.95e-07!83;UBERON:0009618!4.95e-07!83;UBERON:0007285!4.95e-07!83;UBERON:0002199!5.51e-07!45;UBERON:0002416!5.51e-07!45;UBERON:0000486!9.12e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.99e-11;3!UBERON:0000043;2.99e-11;3!UBERON:0007845;2.99e-11;3!UBERON:0004457;2.54e-09;9!UBERON:0000042;2.54e-09;9!UBERON:0005933;1.87e-07;2!UBERON:0005942;1.87e-07;2!UBERON:0005932;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.68e-11,3;UBERON:0000043,2.68e-11,3;UBERON:0007845,2.68e-11,3;UBERON:0005933,1.40e-07,2;UBERON:0005942,1.40e-07,2;UBERON:0005932,1.40e-07,2;UBERON:0004457,6.65e-07,12;UBERON:0000042,6.65e-07,12 | |||
|phase1_expression=0.54503513781167,4.71021152560163,0.563817616383885,4.00293193412522,0,1.74467704820074,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,1.00267582127178,0.724232594804119,0,0.486634870302636,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0,1.53316637465883,0,0,0,0,0,2.98183171017191,0.25326102332916,0.662045904066094,2.29469296599051,0.709336764396714,1.68203280042692,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0,0,0,0.103325781175765,0,1.23633464639278,0,0.718618141816238,0,0,0,0.438977620880838,1.22595118319608,0,0.113432183160021,2.33206526395521,0.85422955527427,1.05965950579781,1.20036438433761,0.721367704669072,0.257640540045629,0.37223371266318,1.5189869901714,0.974370051611986,2.01947019395292,0.276149695926898,1.13152239773168,3.55009592516614,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,1.16344544182,0,0,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0.57191197463259,1.08524321078289,0,0,1.06617584622764,0,0,0,1.29964888536674,0,0,0,1.19812427745791,0,0,1.30303176000821,0.61642896765115,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.271265023699736,1.03985430765404,3.39015078714607,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,1.24053903909388,0.460385919864187,2.80660094433074,1.28139149255701,0.511707249066704,1.93024705372329,0,1.54209693802656,0.532685175939381,0.246381468041427,0.519254429183621,1.62694529843943,0,0,0,0.114814448164607,0.910455840033585,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,2.78907329578371,14.1665556073788,0,0,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0.272999822815972,1.1312434556297,2.26016233240486,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,1.05553817648832,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75177651954586,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,2.17199840701485,1.72844298240254,1.63293680054705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,1.10961172300523,0.189403005275089,0.251567901752575,1.77962244319307,0.457680136793847,0.604923695052956,0.15543720058278,0.147855149989634,0.477890301491107,0.899606224327209,0.155262956876259,0.829412415681711,1.86089200190596,0,0.751288044986092,1.90402606084398,0.813741466409323,0.727394636810238,0.322231671127465,0.464033759878494,3.98095888698616,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0.694567422971502,0,0.537266523244462,0.308801447160972,0,0.706756583783524,0.192914038270915,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,1.43325506366115,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,2.60396512716726,1.38652688589425,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:121409743..121409755,- | |||
}} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121409743..121409755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121409743..121409755, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.18e-17 | 76 |
fibrocyte | 2.68e-11 | 3 |
tendon cell | 2.68e-11 | 3 |
preadipocyte | 1.20e-09 | 12 |
outer root sheath cell | 1.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.68e-11 | 3 |
tendon | 2.68e-11 | 3 |
regular connective tissue | 2.68e-11 | 3 |
hair root sheath | 1.40e-07 | 2 |
hair outer root sheath | 1.40e-07 | 2 |
bulb of hair follicle | 1.40e-07 | 2 |
cavity lining | 6.65e-07 | 12 |
serous membrane | 6.65e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.48e-11 | 3 |
leiomyoma | 4.48e-11 | 3 |
benign neoplasm | 2.10e-08 | 4 |
mesenchymal cell neoplasm | 1.11e-07 | 2 |