FFCP PHASE1:Hg19::chr5:126860297..126860311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:126860297..126860311,+ | |||
|description=CAGE_peak_at_chr5:126860297..126860311,+ | |description=CAGE_peak_at_chr5:126860297..126860311,+ | ||
|id=chr5:126860297..126860311,+ | |id=chr5:126860297..126860311,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002231;6.79e-11;3!CL:1000306;1.36e-08;4!CL:0002547;1.36e-08;4!CL:0000097;6.00e-07;5 | |ontology_enrichment_celltype_v019=CL:0002231;6.79e-11;3!CL:1000306;1.36e-08;4!CL:0002547;1.36e-08;4!CL:0000097;6.00e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.19e-10,3;CL:1000306,3.58e-08,4;CL:0002547,3.58e-08,4;CL:0000097,3.59e-07,5;CL:0002028,3.59e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!2.69e-08!22;UBERON:0000079!2.69e-08!22 | |ontology_enrichment_uberon=UBERON:0003101!2.69e-08!22;UBERON:0000079!2.69e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003101;5.79e-11;22!UBERON:0000079;5.79e-11;22!UBERON:0003937;1.05e-09;12!UBERON:0005399;1.05e-09;12!UBERON:0004797;1.36e-08;4!UBERON:0000415;1.36e-08;4!UBERON:0007240;1.36e-08;4!UBERON:0005742;1.36e-08;4!UBERON:0005734;1.36e-08;4!UBERON:0004664;1.36e-08;4!UBERON:0004663;1.36e-08;4!UBERON:0002367;1.45e-07;11!UBERON:0010147;1.45e-07;11!UBERON:0002072;6.00e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003101;5.79e-11;22!UBERON:0000079;5.79e-11;22!UBERON:0003937;1.05e-09;12!UBERON:0005399;1.05e-09;12!UBERON:0004797;1.36e-08;4!UBERON:0000415;1.36e-08;4!UBERON:0007240;1.36e-08;4!UBERON:0005742;1.36e-08;4!UBERON:0005734;1.36e-08;4!UBERON:0004664;1.36e-08;4!UBERON:0004663;1.36e-08;4!UBERON:0002367;1.45e-07;11!UBERON:0010147;1.45e-07;11!UBERON:0002072;6.00e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,3.90e-11,22;UBERON:0000079,3.90e-11,22;UBERON:0003064,2.28e-10,28;UBERON:0003937,9.98e-10,12;UBERON:0005399,9.98e-10,12;UBERON:0000415,3.58e-08,4;UBERON:0007240,3.58e-08,4;UBERON:0005742,3.58e-08,4;UBERON:0005734,3.58e-08,4;UBERON:0004664,3.58e-08,4;UBERON:0004663,3.58e-08,4;UBERON:0004876,8.16e-08,11;UBERON:0004122,1.24e-07,15;UBERON:0002367,1.75e-07,11;UBERON:0010147,1.75e-07,11;UBERON:0009846,1.75e-07,11;UBERON:0003353,1.75e-07,11;UBERON:0004902,1.75e-07,11;UBERON:0003820,1.75e-07,11;UBERON:0009847,1.75e-07,11;UBERON:0002072,6.52e-07,5 | |||
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| ||
|short_description=p@chr5:126860297..126860311,+ | |short_description=p@chr5:126860297..126860311,+ | ||
}} | }} |
Latest revision as of 09:20, 30 July 2015
Short description: | p@chr5:126860297..126860311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:126860297..126860311, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.19e-10 | 3 |
fibroblast of tunica adventitia of artery | 3.58e-08 | 4 |
fibroblast of the aortic adventitia | 3.58e-08 | 4 |
mast cell | 3.59e-07 | 5 |
basophil mast progenitor cell | 3.59e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
male organism | 3.90e-11 | 22 |
male reproductive system | 3.90e-11 | 22 |
intermediate mesoderm | 2.28e-10 | 28 |
sex gland | 9.98e-10 | 12 |
male reproductive gland | 9.98e-10 | 12 |
artery wall | 3.58e-08 | 4 |
tunica adventitia of artery | 3.58e-08 | 4 |
adventitia | 3.58e-08 | 4 |
tunica adventitia of blood vessel | 3.58e-08 | 4 |
aorta tunica adventitia | 3.58e-08 | 4 |
aorta wall | 3.58e-08 | 4 |
urogenital ridge | 8.16e-08 | 11 |
genitourinary system | 1.24e-07 | 15 |
prostate gland | 1.75e-07 | 11 |
male accessory sex gland | 1.75e-07 | 11 |
embryonic cloacal epithelium | 1.75e-07 | 11 |
epithelium of hindgut | 1.75e-07 | 11 |
urogenital sinus epithelium | 1.75e-07 | 11 |
prostate bud | 1.75e-07 | 11 |
prostate field | 1.75e-07 | 11 |
hypodermis | 6.52e-07 | 5 |